RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 FOXL2NBQ6ZUU3 175 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 GTSCR1Q86UQ5 136 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 C1orf158Q8N1D5 194 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 PGLYRP4Q96LB8 373 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 SHANK2-AS3Q9BTD1 123 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 LINC00527Q9UJ94 153 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 TRIP12Q14669 1992 aaPredicted RBP4.41□□□□□ -1.7
HMGB4-202ENST00000458277 FANCMQ8IYD8 2048 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1-8A0A0C4DH67 115 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 LOC101059948A0A1B0GTJ6 334 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 PGPA6NDG6 321 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 TMEM150CB9EJG8 249 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 K7EM74 188 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 M0R135 149 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 CDX4O14627 284 aaPredicted RBP4.4□□□□□ -1.71
HMGB4-202ENST00000458277 BCE1O60756 84 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 CD52P31358 61 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 LEPP41159 167 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 PCBD1P61457 104 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 DEFB134Q4QY38 66 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 Q6ZR03 302 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 Q6ZSN1 163 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 C5orf38Q86SI9 138 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 UBALD1Q8TB05 177 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 NTN5Q8WTR8 489 aaPredicted RBP4.4□□□□□ -1.71
HMGB4-202ENST00000458277 NABP2Q9BQ15 211 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 FAM173AQ9BQD7 235 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 TIMM8BQ9Y5J9 83 aaPredicted RBP4.4□□□□□ -1.71
HMGB4-202ENST00000458277 NUMA1Q14980 2115 aa4.4□□□□□ -1.71
HMGB4-202ENST00000458277 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 WT1P19544 449 aaPredicted RBP4.39□□□□□ -1.71
HMGB4-202ENST00000458277 IFI27P40305 119 aaPredicted RBP4.39□□□□□ -1.71
HMGB4-202ENST00000458277 IGLV3-21P80748 117 aaPredicted RBP4.39□□□□□ -1.71
HMGB4-202ENST00000458277 LOXL1Q08397 574 aaPredicted RBP4.39□□□□□ -1.71
HMGB4-202ENST00000458277 RSPO1Q2MKA7 263 aaPredicted RBP4.39□□□□□ -1.71
HMGB4-202ENST00000458277 PIGYQ3MUY2 71 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 CLLU1OSQ5K130 101 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 TMEM200BQ69YZ2 307 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 C2orf82Q6UX34 121 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 SCGB1D4Q6XE38 83 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 NABP1Q96AH0 204 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF799Q96GE5 643 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 COX14Q96I36 57 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 PRO3102Q9H379 93 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 CALYQ9NYX4 217 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 KIAA2026Q5HYC2 2103 aa4.39□□□□□ -1.71
HMGB4-202ENST00000458277 LAMA2P24043 3122 aaKnown RBP4.38□□□□□ -1.71
HMGB4-202ENST00000458277 TRBV30A0A0K0K1B3 111 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 WI2-2373I1.2A0A1W2PRP0 233 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 KNCNA6PVL3 124 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 C4orf51C9J302 202 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 ZFAND5O76080 213 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 NGFP01138 241 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 CT62P0C5K7 136 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 CISD3P0C7P0 127 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 LIFP15018 202 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 SLC25A16P16260 332 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 TNFRSF4P43489 277 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 SSR4P51571 173 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 CCL11P51671 97 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 TIRAPP58753 221 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 RPL18AQ02543 176 aaKnown RBP4.38□□□□□ -1.71
HMGB4-202ENST00000458277 ASPHD1Q5U4P2 390 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 ZFP2Q6ZN57 461 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 VN1R4Q7Z5H5 301 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF329Q86UD4 541 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 C11orf53Q8IXP5 236 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 Q8IYB0 196 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 LYZL4Q96KX0 146 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF714Q96N38 554 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 PAXXQ9BUH6 204 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 DEPPQ9NTK1 212 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 DKK2Q9UBU2 259 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 PKIGQ9Y2B9 76 aa4.38□□□□□ -1.71
HMGB4-202ENST00000458277 TDRD6O60522 2096 aaKnown RBP4.37□□□□□ -1.71
HMGB4-202ENST00000458277 DOCK11Q5JSL3 2073 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 THADAQ6YHU6 1953 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 A0A096LNJ9 63 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 IGKV2D-26A0A0A0MRZ7 120 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 TRGV5A0A0B4J1U4 118 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 A0A1W2PRX2 142 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 TMEM89A2RUT3 159 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 EPM2AB3EWF7 344 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 PRSS46E5RG02 174 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 F8VRH5 84 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 C16orf97H3BN30 126 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 LY6LH3BQJ8 138 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 UPK2O00526 184 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 NDUFC1O43677 76 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 LYZL6O75951 148 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 CFC1P0CG37 223 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 INAFM2P0DMQ5 153 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms