RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 WDR61Q9GZS3 305 aaKnown RBP11.6□□□□□ -0.55
CPSF6-203ENST00000456847 CDKN1BP46527 198 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 LINC01587Q99440 93 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 ATP5SQ99766 215 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 HSPB11Q9Y547 144 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 TIMM9Q9Y5J7 89 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 ALG5Q9Y673 324 aa11.59□□□□□ -0.55
CPSF6-203ENST00000456847 PRAC2D3DTV9 90 aa11.58□□□□□ -0.55
CPSF6-203ENST00000456847 PYYP10082 97 aa11.58□□□□□ -0.55
CPSF6-203ENST00000456847 HTN3P15516 51 aa11.58□□□□□ -0.55
CPSF6-203ENST00000456847 TMEM256Q8N2U0 113 aa11.58□□□□□ -0.55
CPSF6-203ENST00000456847 RPP25LQ8N5L8 163 aaKnown RBP11.58□□□□□ -0.55
CPSF6-203ENST00000456847 BLNKQ8WV28 456 aa11.58□□□□□ -0.55
CPSF6-203ENST00000456847 MBD2Q9UBB5 411 aa11.58□□□□□ -0.55
CPSF6-203ENST00000456847 ZNF253O75346 499 aa11.58□□□□□ -0.56
CPSF6-203ENST00000456847 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
CPSF6-203ENST00000456847 TSPOP30536 169 aa11.58□□□□□ -0.56
CPSF6-203ENST00000456847 DAD1P61803 113 aa11.58□□□□□ -0.56
CPSF6-203ENST00000456847 NDUFAF3Q9BU61 184 aa11.58□□□□□ -0.56
CPSF6-203ENST00000456847 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.56
CPSF6-203ENST00000456847 TRBV19A0A075B6N1 114 aa11.57□□□□□ -0.56
CPSF6-203ENST00000456847 PTTG1O95997 202 aa11.57□□□□□ -0.56
CPSF6-203ENST00000456847 PRM2P04554 102 aa11.57□□□□□ -0.56
CPSF6-203ENST00000456847 HTN1P15515 57 aa11.57□□□□□ -0.56
CPSF6-203ENST00000456847 RPL12P30050 165 aaKnown RBP11.57□□□□□ -0.56
CPSF6-203ENST00000456847 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
CPSF6-203ENST00000456847 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
CPSF6-203ENST00000456847 PLA2G2EQ9NZK7 142 aa11.57□□□□□ -0.56
CPSF6-203ENST00000456847 IFNA5P01569 189 aa11.56□□□□□ -0.56
CPSF6-203ENST00000456847 SCGB1C1Q8TD33 95 aa11.56□□□□□ -0.56
CPSF6-203ENST00000456847 SLC25A2Q9BXI2 301 aa11.56□□□□□ -0.56
CPSF6-203ENST00000456847 MRPL32Q9BYC8 188 aaKnown RBP11.56□□□□□ -0.56
CPSF6-203ENST00000456847 J3KRW8 73 aa11.56□□□□□ -0.56
CPSF6-203ENST00000456847 MRPL53Q96EL3 112 aaKnown RBP11.56□□□□□ -0.56
CPSF6-203ENST00000456847 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
CPSF6-203ENST00000456847 LEPP41159 167 aa11.55□□□□□ -0.56
CPSF6-203ENST00000456847 TAS2R60P59551 318 aa11.55□□□□□ -0.56
CPSF6-203ENST00000456847 PDE6HQ13956 83 aa11.55□□□□□ -0.56
CPSF6-203ENST00000456847 OXA1LQ15070 435 aa11.55□□□□□ -0.56
CPSF6-203ENST00000456847 PRELID1Q9Y255 219 aa11.55□□□□□ -0.56
CPSF6-203ENST00000456847 LYRM9A8MSI8 78 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 M0R3E3 92 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 AZU1P20160 251 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 FFAR4Q5NUL3 377 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 C16orf74Q96GX8 76 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 OR51M1Q9H341 326 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 NPIPB6E9PJ23 425 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 NDUFB4O95168 129 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 GFI1BQ5VTD9 330 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 PAXXQ9BUH6 204 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 MED28Q9H204 178 aa11.54□□□□□ -0.56
CPSF6-203ENST00000456847 H7BYZ3 331 aa11.53□□□□□ -0.56
CPSF6-203ENST00000456847 OR7C2O60412 319 aa11.53□□□□□ -0.56
CPSF6-203ENST00000456847 KIR3DS1Q14943 382 aa11.53□□□□□ -0.56
CPSF6-203ENST00000456847 FAM167A-AS1Q96KT0 104 aa11.53□□□□□ -0.56
CPSF6-203ENST00000456847 ODF3Q96PU9 254 aa11.53□□□□□ -0.56
CPSF6-203ENST00000456847 OR10J4P0C629 311 aa11.52□□□□□ -0.56
CPSF6-203ENST00000456847 CT45A10P0DMU9 189 aa11.52□□□□□ -0.56
CPSF6-203ENST00000456847 DEFB130BP0DP73 79 aa11.52□□□□□ -0.56
CPSF6-203ENST00000456847 DEFB130AP0DP74 79 aa11.52□□□□□ -0.56
CPSF6-203ENST00000456847 ICAM4Q14773 271 aa11.52□□□□□ -0.56
CPSF6-203ENST00000456847 NBEAP1P0C6P0 100 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 P0DMU3 169 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 FAM231AP0DMU4 169 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 FAM231CP0DMU5 169 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 ERCC8Q13216 396 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 FAM210BQ96KR6 192 aa11.52□□□□□ -0.57
CPSF6-203ENST00000456847 FCN2Q15485 313 aa11.51□□□□□ -0.57
CPSF6-203ENST00000456847 CCDC28AQ8IWP9 274 aa11.51□□□□□ -0.57
CPSF6-203ENST00000456847 TMEM263Q8WUH6 116 aaKnown RBP11.51□□□□□ -0.57
CPSF6-203ENST00000456847 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
CPSF6-203ENST00000456847 TRAV12-3A0A0B4J271 114 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 PLAC8L1A1L4L8 177 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
CPSF6-203ENST00000456847 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 UBE2DNLQ8IWF7 75 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 TAS2R45P59539 299 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 FXYD5Q96DB9 178 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 PHYHIPLQ96FC7 376 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 WFDC1Q9HC57 220 aa11.5□□□□□ -0.57
CPSF6-203ENST00000456847 TIMM8BQ9Y5J9 83 aaPredicted RBP11.5□□□□□ -0.57
CPSF6-203ENST00000456847 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
CPSF6-203ENST00000456847 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
CPSF6-203ENST00000456847 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
CPSF6-203ENST00000456847 TMEM88Q6PEY1 159 aa11.49□□□□□ -0.57
CPSF6-203ENST00000456847 RNASE8Q8TDE3 154 aaKnown RBP11.49□□□□□ -0.57
CPSF6-203ENST00000456847 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
CPSF6-203ENST00000456847 NOP10Q9NPE3 64 aaKnown RBP11.49□□□□□ -0.57
CPSF6-203ENST00000456847 SLC25A5P05141 298 aaKnown RBP11.48□□□□□ -0.57
CPSF6-203ENST00000456847 ACOT6Q3I5F7 207 aaPredicted RBP11.48□□□□□ -0.57
CPSF6-203ENST00000456847 C7orf71A4D174 169 aa11.48□□□□□ -0.57
CPSF6-203ENST00000456847 AGPAT4-IT1Q9H0P7 198 aa11.48□□□□□ -0.57
CPSF6-203ENST00000456847 SNURFLB1AK76 121 aa11.47□□□□□ -0.57
CPSF6-203ENST00000456847 F5H768 121 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms