RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CLUHP3Q96NS8 147 aa13.17□□□□□ -0.3
FAM239A-203ENST00000456563 B9D2Q9BPU9 175 aa13.17□□□□□ -0.3
FAM239A-203ENST00000456563 KIR2DL5BA0A0G2JN68 375 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 KIR2DL5BA0A0G2JPC4 375 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 F6UB75 175 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 FGF8P55075 233 aaPredicted RBP13.16□□□□□ -0.3
FAM239A-203ENST00000456563 ICAM4Q14773 271 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 KIR2DL5AQ8N109 375 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 Q9H3A6 140 aa13.16□□□□□ -0.3
FAM239A-203ENST00000456563 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
FAM239A-203ENST00000456563 M0R3E3 92 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 H2AFB1P0C5Y9 115 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
FAM239A-203ENST00000456563 FAM74A1Q5RGS3 127 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 ALKAL2Q6UX46 152 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 OR8A1Q8NGG7 326 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 SFT2D1Q8WV19 159 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
FAM239A-203ENST00000456563 A8MTW9 85 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 DUSP14O95147 198 aaKnown RBP13.14□□□□□ -0.31
FAM239A-203ENST00000456563 APOC4P55056 127 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 HAGHQ16775 308 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
FAM239A-203ENST00000456563 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
FAM239A-203ENST00000456563 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
FAM239A-203ENST00000456563 PGPA6NDG6 321 aa13.13□□□□□ -0.31
FAM239A-203ENST00000456563 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
FAM239A-203ENST00000456563 MORN3Q6PF18 240 aaPredicted RBP13.13□□□□□ -0.31
FAM239A-203ENST00000456563 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
FAM239A-203ENST00000456563 UBE2CO00762 179 aa13.12□□□□□ -0.31
FAM239A-203ENST00000456563 ZNF705DP0CH99 300 aaPredicted RBP13.12□□□□□ -0.31
FAM239A-203ENST00000456563 ZNF705BP0CI00 300 aaPredicted RBP13.12□□□□□ -0.31
FAM239A-203ENST00000456563 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
FAM239A-203ENST00000456563 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
FAM239A-203ENST00000456563 OR10J6PQ8NGY7 276 aa13.12□□□□□ -0.31
FAM239A-203ENST00000456563 RXFP4Q8TDU9 374 aa13.12□□□□□ -0.31
FAM239A-203ENST00000456563 HBE1P02100 147 aa13.11□□□□□ -0.31
FAM239A-203ENST00000456563 CSN1S1P47710 185 aa13.11□□□□□ -0.31
FAM239A-203ENST00000456563 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
FAM239A-203ENST00000456563 HIST1H1AQ02539 215 aaPredicted RBP13.11□□□□□ -0.31
FAM239A-203ENST00000456563 ASCL2Q99929 193 aa13.11□□□□□ -0.31
FAM239A-203ENST00000456563 AGRNO00468 2067 aa13.1□□□□□ -0.31
FAM239A-203ENST00000456563 ZNF705EA8MWA4 302 aaPredicted RBP13.1□□□□□ -0.31
FAM239A-203ENST00000456563 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
FAM239A-203ENST00000456563 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
FAM239A-203ENST00000456563 PRB4P10163 310 aaPredicted RBP13.1□□□□□ -0.31
FAM239A-203ENST00000456563 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
FAM239A-203ENST00000456563 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
FAM239A-203ENST00000456563 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
FAM239A-203ENST00000456563 A0A1B0GV50 99 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 NPIPB6E9PJ23 425 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 GIG44P09565 113 aaPredicted RBP13.09□□□□□ -0.31
FAM239A-203ENST00000456563 SUMO1P63165 101 aaKnown RBP13.09□□□□□ -0.31
FAM239A-203ENST00000456563 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 Q6ZWC4 215 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
FAM239A-203ENST00000456563 NKX6-2Q9C056 277 aaPredicted RBP13.09□□□□□ -0.31
FAM239A-203ENST00000456563 YTHDF2Q9Y5A9 579 aaKnown RBP13.09□□□□□ -0.31
FAM239A-203ENST00000456563 PRKDCP78527 4128 aaKnown RBP13.09□□□□□ -0.31
FAM239A-203ENST00000456563 RBAKDNA6NC62 111 aa13.08□□□□□ -0.32
FAM239A-203ENST00000456563 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.32
FAM239A-203ENST00000456563 SLC25A5P05141 298 aaKnown RBP13.08□□□□□ -0.32
FAM239A-203ENST00000456563 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
FAM239A-203ENST00000456563 PPT1P50897 306 aa13.08□□□□□ -0.32
FAM239A-203ENST00000456563 UBE2G2P60604 165 aa13.08□□□□□ -0.32
FAM239A-203ENST00000456563 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.32
FAM239A-203ENST00000456563 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
FAM239A-203ENST00000456563 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
FAM239A-203ENST00000456563 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
FAM239A-203ENST00000456563 CCL20P78556 96 aa13.07□□□□□ -0.32
FAM239A-203ENST00000456563 LINC00477Q96M19 166 aa13.07□□□□□ -0.32
FAM239A-203ENST00000456563 SPATA25Q9BR10 227 aa13.07□□□□□ -0.32
FAM239A-203ENST00000456563 C1QTNF4Q9BXJ3 329 aa13.07□□□□□ -0.32
FAM239A-203ENST00000456563 SLC35B3Q9H1N7 401 aa13.07□□□□□ -0.32
FAM239A-203ENST00000456563 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
FAM239A-203ENST00000456563 PAGE4O60829 102 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 ERCC8Q13216 396 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 PMS2P11Q13670 270 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 ZNF680Q8NEM1 530 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 ODF3Q96PU9 254 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 VGLL1Q99990 258 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 AGPAT4-IT1Q9H0P7 198 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 TP53TG1Q9Y2A0 90 aa13.06□□□□□ -0.32
FAM239A-203ENST00000456563 DNAH9Q9NYC9 4486 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 IFNA7P01567 189 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 AMBPP02760 352 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 TCRAP04437 139 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 CT45A10P0DMU9 189 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
FAM239A-203ENST00000456563 ZMAT4Q9H898 229 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms