RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
MSH6-207ENST00000456246 NPCDR1Q9BY65 106 aa12.71□□□□□ -0.37
MSH6-207ENST00000456246 ZNF705GA8MUZ8 300 aaPredicted RBP12.7□□□□□ -0.38
MSH6-207ENST00000456246 SIX6O95475 246 aa12.7□□□□□ -0.38
MSH6-207ENST00000456246 PDE6HQ13956 83 aa12.7□□□□□ -0.38
MSH6-207ENST00000456246 LRRC37A5PQ49AS3 106 aa12.7□□□□□ -0.38
MSH6-207ENST00000456246 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
MSH6-207ENST00000456246 ODF3Q96PU9 254 aa12.7□□□□□ -0.38
MSH6-207ENST00000456246 LINC01587Q99440 93 aa12.7□□□□□ -0.38
MSH6-207ENST00000456246 TRAV5A0A0B4J249 113 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 H7BYZ3 331 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 SNRPCP09234 159 aaKnown RBP12.69□□□□□ -0.38
MSH6-207ENST00000456246 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
MSH6-207ENST00000456246 NHLH2Q02577 135 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 ZNF493Q6ZR52 646 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 OR5AC2Q9NZP5 309 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 PRELID1Q9Y255 219 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 VPS13DQ5THJ4 4388 aa12.69□□□□□ -0.38
MSH6-207ENST00000456246 TRBV19A0A075B6N1 114 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 H3BTX0 84 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 SSNA1O43805 119 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 HTN3P15516 51 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 THAP6Q8TBB0 222 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 PPP1R1CQ8WVI7 109 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
MSH6-207ENST00000456246 NPIPB6E9PJ23 425 aa12.67□□□□□ -0.38
MSH6-207ENST00000456246 LEPP41159 167 aa12.67□□□□□ -0.38
MSH6-207ENST00000456246 H2BFSP57053 126 aa12.67□□□□□ -0.38
MSH6-207ENST00000456246 C15orf53Q8NAA6 179 aa12.67□□□□□ -0.38
MSH6-207ENST00000456246 TMEM263Q8WUH6 116 aaKnown RBP12.67□□□□□ -0.38
MSH6-207ENST00000456246 TIMM9Q9Y5J7 89 aa12.67□□□□□ -0.38
MSH6-207ENST00000456246 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 PRAC2D3DTV9 90 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 H0YIZ8 118 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 CLINT1Q14677 625 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 MRPL32Q9BYC8 188 aaKnown RBP12.66□□□□□ -0.38
MSH6-207ENST00000456246 WDR61Q9GZS3 305 aaKnown RBP12.66□□□□□ -0.38
MSH6-207ENST00000456246 AAMDCQ9H7C9 122 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
MSH6-207ENST00000456246 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
MSH6-207ENST00000456246 AZU1P20160 251 aa12.65□□□□□ -0.38
MSH6-207ENST00000456246 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
MSH6-207ENST00000456246 CCDC28AQ8IWP9 274 aa12.65□□□□□ -0.38
MSH6-207ENST00000456246 RNASE8Q8TDE3 154 aaKnown RBP12.65□□□□□ -0.38
MSH6-207ENST00000456246 MPC2O95563 127 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 PRM2P04554 102 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 ATP5G1P05496 136 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 DEFB130BP0DP73 79 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 DEFB130AP0DP74 79 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 HTN1P15515 57 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 ATP5G3P48201 142 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 RNF212Q495C1 297 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 GCSAMLQ5JQS6 135 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 TMEM88Q6PEY1 159 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 UBE2DNLQ8IWF7 75 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 ATP5SQ99766 215 aa12.64□□□□□ -0.39
MSH6-207ENST00000456246 CBY3A6NI87 242 aa12.63□□□□□ -0.39
MSH6-207ENST00000456246 PYYP10082 97 aa12.63□□□□□ -0.39
MSH6-207ENST00000456246 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
MSH6-207ENST00000456246 PYGO2Q9BRQ0 406 aa12.63□□□□□ -0.39
MSH6-207ENST00000456246 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
MSH6-207ENST00000456246 HSPB11Q9Y547 144 aa12.63□□□□□ -0.39
MSH6-207ENST00000456246 DNAH6Q9C0G6 4158 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 FRAS1Q86XX4 4008 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 M0R3E3 92 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 NDUFB4O95168 129 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
MSH6-207ENST00000456246 CT45A10P0DMU9 189 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 PRB4P10163 310 aaPredicted RBP12.62□□□□□ -0.39
MSH6-207ENST00000456246 LINC00336Q6ZUF6 198 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 OR51M1Q9H341 326 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 FUT9Q9Y231 359 aa12.62□□□□□ -0.39
MSH6-207ENST00000456246 IFNA5P01569 189 aa12.61□□□□□ -0.39
MSH6-207ENST00000456246 NBEAP1P0C6P0 100 aa12.61□□□□□ -0.39
MSH6-207ENST00000456246 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
MSH6-207ENST00000456246 MIR17HGQ75NE6 70 aa12.61□□□□□ -0.39
MSH6-207ENST00000456246 BLNKQ8WV28 456 aa12.61□□□□□ -0.39
MSH6-207ENST00000456246 PARD6GQ9BYG4 376 aaPredicted RBP12.61□□□□□ -0.39
MSH6-207ENST00000456246 NMBP08949 121 aa12.6□□□□□ -0.39
MSH6-207ENST00000456246 RPL12P30050 165 aaKnown RBP12.6□□□□□ -0.39
MSH6-207ENST00000456246 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
MSH6-207ENST00000456246 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
MSH6-207ENST00000456246 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
MSH6-207ENST00000456246 PAXXQ9BUH6 204 aa12.6□□□□□ -0.39
MSH6-207ENST00000456246 NOP10Q9NPE3 64 aaKnown RBP12.6□□□□□ -0.39
MSH6-207ENST00000456246 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 C7orf71A4D174 169 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 SNURFLB1AK76 121 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 F5H768 121 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 ICAM4Q14773 271 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 FCN2Q15485 313 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 MBD2Q9UBB5 411 aa12.59□□□□□ -0.39
MSH6-207ENST00000456246 KLLNB2CW77 178 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 J3KRW8 73 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 OR7C2O60412 319 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms