RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 DAD1P61803 113 aa15.11■□□□□ 0.01
HMGB3-205ENST00000455596 LINC01587Q99440 93 aa15.11■□□□□ 0.01
HMGB3-205ENST00000455596 ZNF586Q9NXT0 402 aa15.11■□□□□ 0.01
HMGB3-205ENST00000455596 ZNF253O75346 499 aa15.1■□□□□ 0.01
HMGB3-205ENST00000455596 TSPOP30536 169 aa15.1■□□□□ 0.01
HMGB3-205ENST00000455596 CLINT1Q14677 625 aa15.1■□□□□ 0.01
HMGB3-205ENST00000455596 PPP1R1CQ8WVI7 109 aa15.1■□□□□ 0.01
HMGB3-205ENST00000455596 FAM210BQ96KR6 192 aa15.1■□□□□ 0.01
HMGB3-205ENST00000455596 TMEM14CQ9P0S9 112 aa15.1■□□□□ 0.01
HMGB3-205ENST00000455596 PRAC2D3DTV9 90 aa15.09■□□□□ 0.01
HMGB3-205ENST00000455596 PET100P0DJ07 73 aa15.09■□□□□ 0.01
HMGB3-205ENST00000455596 TRBV19A0A075B6N1 114 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 LYRM9A8MSI8 78 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 P0DMU3 169 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 FAM231AP0DMU4 169 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 FAM231CP0DMU5 169 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 HIST1H1EP10412 219 aaKnown RBP15.08■□□□□ 0
HMGB3-205ENST00000455596 HTN3P15516 51 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 TAS2R60P59551 318 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 C20orf144Q9BQM9 153 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 WDR61Q9GZS3 305 aaKnown RBP15.08■□□□□ 0
HMGB3-205ENST00000455596 KCNIP2Q9NS61 270 aa15.08■□□□□ 0
HMGB3-205ENST00000455596 AZU1P20160 251 aa15.07■□□□□ 0
HMGB3-205ENST00000455596 GCSAMLQ5JQS6 135 aa15.07■□□□□ 0
HMGB3-205ENST00000455596 MRPL53Q96EL3 112 aaKnown RBP15.07■□□□□ 0
HMGB3-205ENST00000455596 C17orf112F2Z3M2 114 aa15.06■□□□□ 0
HMGB3-205ENST00000455596 MPC2O95563 127 aa15.06■□□□□ 0
HMGB3-205ENST00000455596 PYYP10082 97 aa15.06■□□□□ 0
HMGB3-205ENST00000455596 HTN1P15515 57 aa15.06■□□□□ 0
HMGB3-205ENST00000455596 C16orf74Q96GX8 76 aa15.06■□□□□ 0
HMGB3-205ENST00000455596 PARD6GQ9BYG4 376 aaPredicted RBP15.06■□□□□ 0
HMGB3-205ENST00000455596 TIMM9Q9Y5J7 89 aa15.06■□□□□ 0
HMGB3-205ENST00000455596 PLAC8L1A1L4L8 177 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 NPIPB6E9PJ23 425 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 H7BYZ3 331 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 PDE6HQ13956 83 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 ATP5SQ99766 215 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 SLC25A2Q9BXI2 301 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 PRELID1Q9Y255 219 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 HSPB11Q9Y547 144 aa15.05■□□□□ -0
HMGB3-205ENST00000455596 EPPK1P58107 5090 aaKnown RBP15.05■□□□□ -0
HMGB3-205ENST00000455596 NDUFB4O95168 129 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 LEPP41159 167 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 KIR3DS1Q14943 382 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 POM121L12Q8N7R1 296 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 BLNKQ8WV28 456 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 ODF3Q96PU9 254 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 AAMDCQ9H7C9 122 aa15.04■□□□□ -0
HMGB3-205ENST00000455596 KMT2AQ03164 3969 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 CT45A10P0DMU9 189 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 DEFB130BP0DP73 79 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 DEFB130AP0DP74 79 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 GFI1BQ5VTD9 330 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 ZNF493Q6ZR52 646 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 MIR17HGQ75NE6 70 aa15.03■□□□□ -0
HMGB3-205ENST00000455596 MRPL32Q9BYC8 188 aaKnown RBP15.03■□□□□ -0
HMGB3-205ENST00000455596 J3KRW8 73 aa15.02■□□□□ -0
HMGB3-205ENST00000455596 M0R3E3 92 aa15.02■□□□□ -0
HMGB3-205ENST00000455596 RPL12P30050 165 aaKnown RBP15.02■□□□□ -0
HMGB3-205ENST00000455596 FCN2Q15485 313 aa15.02■□□□□ -0
HMGB3-205ENST00000455596 TMEM263Q8WUH6 116 aaKnown RBP15.02■□□□□ -0
HMGB3-205ENST00000455596 FAM167A-AS1Q96KT0 104 aa15.02■□□□□ -0
HMGB3-205ENST00000455596 OR51M1Q9H341 326 aa15.02■□□□□ -0
HMGB3-205ENST00000455596 MBD2Q9UBB5 411 aa15.02■□□□□ -0
HMGB3-205ENST00000455596 TIMM8BQ9Y5J9 83 aaPredicted RBP15.02■□□□□ -0
HMGB3-205ENST00000455596 TMEM88Q6PEY1 159 aa15.01□□□□□ -0.01
HMGB3-205ENST00000455596 EXOC3-AS1Q8N2X6 119 aa15.01□□□□□ -0.01
HMGB3-205ENST00000455596 RNASE8Q8TDE3 154 aaKnown RBP15.01□□□□□ -0.01
HMGB3-205ENST00000455596 FUT9Q9Y231 359 aa15.01□□□□□ -0.01
HMGB3-205ENST00000455596 IFNA5P01569 189 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 NBEAP1P0C6P0 100 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 UBE2DNLQ8IWF7 75 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 CCDC28AQ8IWP9 274 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 SCGB1C1Q8TD33 95 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 PAXXQ9BUH6 204 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 SMIM3Q9BZL3 60 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 ALG5Q9Y673 324 aa15□□□□□ -0.01
HMGB3-205ENST00000455596 ERCC8Q13216 396 aa14.99□□□□□ -0.01
HMGB3-205ENST00000455596 ICAM4Q14773 271 aa14.99□□□□□ -0.01
HMGB3-205ENST00000455596 LINC00477Q96M19 166 aa14.99□□□□□ -0.01
HMGB3-205ENST00000455596 TRAV12-3A0A0B4J271 114 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 CBY3A6NI87 242 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 PTTG1O95997 202 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 SLC25A5P05141 298 aaKnown RBP14.98□□□□□ -0.01
HMGB3-205ENST00000455596 ATP5G1P05496 136 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 OR10J4P0C629 311 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 ATP5G3P48201 142 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 FFAR4Q5NUL3 377 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 C15orf53Q8NAA6 179 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 RNF141Q8WVD5 230 aa14.98□□□□□ -0.01
HMGB3-205ENST00000455596 NOP10Q9NPE3 64 aaKnown RBP14.98□□□□□ -0.01
HMGB3-205ENST00000455596 NACAE9PAV3 2078 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 F5H768 121 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 OR7C2O60412 319 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 FAM122CQ6P4D5 195 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 FXYD5Q96DB9 178 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 PYGO2Q9BRQ0 406 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 AGPAT4-IT1Q9H0P7 198 aa14.97□□□□□ -0.01
HMGB3-205ENST00000455596 C9orf47Q6ZRZ4 202 aa14.96□□□□□ -0.01
HMGB3-205ENST00000455596 C7orf71A4D174 169 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms