RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CST9LP1Q5W188 147 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 LINC00052Q96N35 136 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 ZMAT5Q9UDW3 170 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 VAX2Q9UIW0 290 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 RBFOX3A6NFN3 312 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 CD7P09564 240 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 CMC4P56277 68 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 MEF2BQ02080 365 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 ZNF506Q5JVG8 444 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 C5orf17Q8NAS9 161 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 RXFP4Q8TDU9 374 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
CCDC90B-202ENST00000455220 DEFB131AP59861 70 aa12.34□□□□□ -0.43
CCDC90B-202ENST00000455220 KRTAP10-11P60412 298 aa12.34□□□□□ -0.43
CCDC90B-202ENST00000455220 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
CCDC90B-202ENST00000455220 RARRES2Q99969 163 aa12.34□□□□□ -0.43
CCDC90B-202ENST00000455220 ZNF705FA8MVS1 300 aaPredicted RBP12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 SLC25A5P05141 298 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 CD81P60033 236 aa12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 CMTM2Q8TAZ6 248 aa12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 RPUSD4Q96CM3 377 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 EPDR1Q9UM22 224 aa12.33□□□□□ -0.44
CCDC90B-202ENST00000455220 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
CCDC90B-202ENST00000455220 PRAC2D3DTV9 90 aa12.32□□□□□ -0.44
CCDC90B-202ENST00000455220 NDUFS6O75380 124 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-202ENST00000455220 CSN1S1P47710 185 aa12.32□□□□□ -0.44
CCDC90B-202ENST00000455220 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-202ENST00000455220 GTSCR1Q86UQ5 136 aa12.32□□□□□ -0.44
CCDC90B-202ENST00000455220 LINC00862A6NCI5 91 aa12.31□□□□□ -0.44
CCDC90B-202ENST00000455220 DIRC3C9JPN6 131 aa12.31□□□□□ -0.44
CCDC90B-202ENST00000455220 TCRAP04437 139 aa12.31□□□□□ -0.44
CCDC90B-202ENST00000455220 GNG5P63218 68 aa12.31□□□□□ -0.44
CCDC90B-202ENST00000455220 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
CCDC90B-202ENST00000455220 EIF5A2Q9GZV4 153 aaKnown RBP12.31□□□□□ -0.44
CCDC90B-202ENST00000455220 RAB19A4D1S5 217 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 DEFB1P60022 68 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 Q8N1Y9 231 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 C11orf52Q96A22 123 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 ATG101Q9BSB4 218 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 SAV1Q9H4B6 383 aaPredicted RBP12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 A0A0J9YX75 114 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 RBAKDNA6NC62 111 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 PEX7O00628 323 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 PDE6DO43924 150 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 APRG1Q8IVJ8 170 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 PRR25Q96S07 402 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 SMDT1Q9H4I9 107 aa12.3□□□□□ -0.44
CCDC90B-202ENST00000455220 SCO2A0A1W2PP80 73 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 F6UB75 175 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 F6UZH7 168 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 PRB4P10163 310 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 ZNF124Q15973 351 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 GDF5OSQ5U4N7 250 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 GOLT1AQ6ZVE7 132 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 CYB561D1Q8N8Q1 229 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 AGRNO00468 2067 aa12.29□□□□□ -0.44
CCDC90B-202ENST00000455220 IGKV2-40A0A087WW87 121 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 IGKV2D-40P01614 121 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 PEA15Q15121 130 aa12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 C2CD4CQ8TF44 421 aa12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 RPH3ALQ9UNE2 315 aa12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
CCDC90B-202ENST00000455220 KNCNA6PVL3 124 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 A8MTW9 85 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 TMEM250H0YL14 139 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 EBLN2Q6P2I7 272 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 OR10J6PQ8NGY7 276 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 CITED4Q96RK1 184 aa12.27□□□□□ -0.44
CCDC90B-202ENST00000455220 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 H3BMM0 161 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 K7EQM0 130 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 SRP19P09132 144 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 ZNF705DP0CH99 300 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 ZNF705BP0CI00 300 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 ACTL10Q5JWF8 245 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 COMMD7Q86VX2 200 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 EIF4E3Q8N5X7 224 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 DEFB125Q8N687 156 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 VGLL1Q99990 258 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 KLF12Q9Y4X4 402 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 C9JQL5 133 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 IGLV2-11P01706 119 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 CNN1P51911 297 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 HIST1H1AQ02539 215 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 CLUHP3Q96NS8 147 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms