RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 F5H768 121 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 H7BYZ3 331 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 ATP5G1P05496 136 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 HTN1P15515 57 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 ATP5G3P48201 142 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 BCAP31P51572 246 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 TMEM252Q8N6L7 170 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 CCDC32Q9BV29 185 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 LYRM2Q9NU23 88 aaPredicted RBP12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 ZNF586Q9NXT0 402 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 NDUFA13Q9P0J0 144 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 PXMP4Q9Y6I8 212 aa12.94□□□□□ -0.34
UBE2D4-208ENST00000454350 H2AFB2P0C5Z0 115 aa12.93□□□□□ -0.34
UBE2D4-208ENST00000454350 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
UBE2D4-208ENST00000454350 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-208ENST00000454350 RAB32Q13637 225 aa12.93□□□□□ -0.34
UBE2D4-208ENST00000454350 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
UBE2D4-208ENST00000454350 NPIPB6E9PJ23 425 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 SULT1A1P50225 295 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 RAB31Q13636 194 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 C1orf134Q5TEV5 83 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 Q6ZRG5 221 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 OR10J6PQ8NGY7 276 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 RNF141Q8WVD5 230 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
UBE2D4-208ENST00000454350 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
UBE2D4-208ENST00000454350 ZNF253O75346 499 aa12.91□□□□□ -0.34
UBE2D4-208ENST00000454350 S100A11P31949 105 aa12.91□□□□□ -0.34
UBE2D4-208ENST00000454350 GUK1Q16774 197 aa12.91□□□□□ -0.34
UBE2D4-208ENST00000454350 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
UBE2D4-208ENST00000454350 LINC00588Q9Y4M8 146 aa12.91□□□□□ -0.34
UBE2D4-208ENST00000454350 NDUFB4O95168 129 aa12.9□□□□□ -0.34
UBE2D4-208ENST00000454350 NUDT3O95989 172 aa12.9□□□□□ -0.34
UBE2D4-208ENST00000454350 S100A10P60903 97 aa12.9□□□□□ -0.34
UBE2D4-208ENST00000454350 PFDN5Q99471 154 aa12.9□□□□□ -0.34
UBE2D4-208ENST00000454350 RYR1P21817 5038 aa12.9□□□□□ -0.34
UBE2D4-208ENST00000454350 TRBV19A0A075B6N1 114 aa12.89□□□□□ -0.35
UBE2D4-208ENST00000454350 M0R3E3 92 aa12.89□□□□□ -0.35
UBE2D4-208ENST00000454350 PVALBP20472 110 aaPredicted RBP12.89□□□□□ -0.35
UBE2D4-208ENST00000454350 BAXQ07812 192 aa12.89□□□□□ -0.35
UBE2D4-208ENST00000454350 ATG101Q9BSB4 218 aa12.89□□□□□ -0.35
UBE2D4-208ENST00000454350 TMEM14CQ9P0S9 112 aa12.89□□□□□ -0.35
UBE2D4-208ENST00000454350 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 HOXA5P20719 270 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 SOHLH1Q5JUK2 328 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 ZNF575Q86XF7 245 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 MRPL53Q96EL3 112 aaKnown RBP12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 FAM19A4Q96LR4 140 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 HSPG2P98160 4391 aa12.88□□□□□ -0.35
UBE2D4-208ENST00000454350 TRAV12-3A0A0B4J271 114 aa12.87□□□□□ -0.35
UBE2D4-208ENST00000454350 J3KRW8 73 aa12.87□□□□□ -0.35
UBE2D4-208ENST00000454350 FGF7P21781 194 aa12.87□□□□□ -0.35
UBE2D4-208ENST00000454350 ASAH1Q13510 395 aa12.87□□□□□ -0.35
UBE2D4-208ENST00000454350 STX12Q86Y82 276 aa12.87□□□□□ -0.35
UBE2D4-208ENST00000454350 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
UBE2D4-208ENST00000454350 PYYP10082 97 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 HIST1H1EP10412 219 aaKnown RBP12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 LEPP41159 167 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 HBG1P69891 147 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 HBG2P69892 147 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 NHLH2Q02577 135 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 TNP2Q05952 138 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 ERCC8Q13216 396 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 ATP6V1FQ16864 119 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
UBE2D4-208ENST00000454350 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 KLLNB2CW77 178 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 MPDU1O75352 247 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 CCL18P55774 89 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 DAZ2Q13117 558 aaKnown RBP12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 C11orf72Q8NBR9 251 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 SLC25A2Q9BXI2 301 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 AGPAT4-IT1Q9H0P7 198 aa12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 GPN1Q9HCN4 374 aaPredicted RBP12.85□□□□□ -0.35
UBE2D4-208ENST00000454350 GAGE12BA1L429 117 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 H0YIZ8 118 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 GAGE7O76087 117 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 SIX6O95475 246 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 GAGE12FP0CL80 117 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 GAGE12GP0CL81 117 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 GAGE12IP0CL82 117 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 PDE6HQ13956 83 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 MZT2BQ6NZ67 158 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 Q6ZTI0 123 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 SSX7Q7RTT5 188 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 RXFP4Q8TDU9 374 aa12.84□□□□□ -0.35
UBE2D4-208ENST00000454350 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms