RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PQLC2Q6ZP29 291 aa20.39■□□□□ 0.85
SMARCC1-203ENST00000454240 MRPL53Q96EL3 112 aaKnown RBP20.39■□□□□ 0.85
SMARCC1-203ENST00000454240 SLC35B3Q9H1N7 401 aa20.39■□□□□ 0.85
SMARCC1-203ENST00000454240 PRAC2D3DTV9 90 aa20.38■□□□□ 0.85
SMARCC1-203ENST00000454240 BCL2L11O43521 198 aa20.38■□□□□ 0.85
SMARCC1-203ENST00000454240 TMUB2Q71RG4 321 aa20.38■□□□□ 0.85
SMARCC1-203ENST00000454240 XCL2Q9UBD3 114 aa20.38■□□□□ 0.85
SMARCC1-203ENST00000454240 PRELID1Q9Y255 219 aa20.38■□□□□ 0.85
SMARCC1-203ENST00000454240 KANTRA0A1W2PQU2 76 aa20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 PRB4P10163 310 aaPredicted RBP20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 FXYD7P58549 80 aa20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 UBE2L3P68036 154 aaKnown RBP20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 HIST1H1AQ02539 215 aaPredicted RBP20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 EXOC3-AS1Q8N2X6 119 aa20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 RAB24Q969Q5 203 aa20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 RARRES2Q99969 163 aa20.37■□□□□ 0.85
SMARCC1-203ENST00000454240 STAG3L2P0CL84 134 aa20.36■□□□□ 0.85
SMARCC1-203ENST00000454240 STAG3L3P0CL85 134 aa20.36■□□□□ 0.85
SMARCC1-203ENST00000454240 OR11H2Q8NH07 326 aa20.36■□□□□ 0.85
SMARCC1-203ENST00000454240 PHYHIPLQ96FC7 376 aa20.36■□□□□ 0.85
SMARCC1-203ENST00000454240 AAMDCQ9H7C9 122 aa20.36■□□□□ 0.85
SMARCC1-203ENST00000454240 M0R3E3 92 aa20.35■□□□□ 0.85
SMARCC1-203ENST00000454240 HMGB3O15347 200 aaKnown RBP20.35■□□□□ 0.85
SMARCC1-203ENST00000454240 LGALSLQ3ZCW2 172 aaPredicted RBP20.35■□□□□ 0.85
SMARCC1-203ENST00000454240 ACTR3CQ9C0K3 210 aaPredicted RBP20.35■□□□□ 0.85
SMARCC1-203ENST00000454240 DNAH7Q8WXX0 4024 aa20.35■□□□□ 0.85
SMARCC1-203ENST00000454240 ICAM4Q14773 271 aa20.34■□□□□ 0.85
SMARCC1-203ENST00000454240 LYPD1Q8N2G4 141 aa20.34■□□□□ 0.85
SMARCC1-203ENST00000454240 HYLS1Q96M11 299 aa20.34■□□□□ 0.85
SMARCC1-203ENST00000454240 ZNF471Q9BX82 626 aaPredicted RBP20.34■□□□□ 0.85
SMARCC1-203ENST00000454240 ZNF705EA8MWA4 302 aaPredicted RBP20.33■□□□□ 0.85
SMARCC1-203ENST00000454240 ARL14EPLP0DKL9 152 aa20.33■□□□□ 0.85
SMARCC1-203ENST00000454240 CD300CQ08708 224 aa20.33■□□□□ 0.85
SMARCC1-203ENST00000454240 OR10J6PQ8NGY7 276 aa20.33■□□□□ 0.85
SMARCC1-203ENST00000454240 PFDN1O60925 122 aa20.32■□□□□ 0.84
SMARCC1-203ENST00000454240 RANP62826 216 aaKnown RBP20.32■□□□□ 0.84
SMARCC1-203ENST00000454240 AKR1C8PQ5T2L2 129 aa20.32■□□□□ 0.84
SMARCC1-203ENST00000454240 SEC11BP0C7V7 166 aa20.31■□□□□ 0.84
SMARCC1-203ENST00000454240 ZNF726P1Q15940 193 aa20.31■□□□□ 0.84
SMARCC1-203ENST00000454240 SSX7Q7RTT5 188 aa20.31■□□□□ 0.84
SMARCC1-203ENST00000454240 Q9H3A6 140 aa20.31■□□□□ 0.84
SMARCC1-203ENST00000454240 AMBPP02760 352 aa20.3■□□□□ 0.84
SMARCC1-203ENST00000454240 EIF5AP63241 154 aaKnown RBP20.3■□□□□ 0.84
SMARCC1-203ENST00000454240 SPINK13Q1W4C9 94 aa20.3■□□□□ 0.84
SMARCC1-203ENST00000454240 SUN5Q8TC36 379 aa20.3■□□□□ 0.84
SMARCC1-203ENST00000454240 X6R8D5 127 aa20.3■□□□□ 0.84
SMARCC1-203ENST00000454240 A0A0J9YWU9 116 aa20.29■□□□□ 0.84
SMARCC1-203ENST00000454240 NPIPB6E9PJ23 425 aa20.29■□□□□ 0.84
SMARCC1-203ENST00000454240 BOLA2-SMG1P6H3BVE0 249 aa20.29■□□□□ 0.84
SMARCC1-203ENST00000454240 ZNF705AQ6ZN79 300 aaPredicted RBP20.29■□□□□ 0.84
SMARCC1-203ENST00000454240 BAP18Q8IXM2 172 aa20.29■□□□□ 0.84
SMARCC1-203ENST00000454240 PLA2G2EQ9NZK7 142 aa20.29■□□□□ 0.84
SMARCC1-203ENST00000454240 CTXND1A0A1B0GTU2 59 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 M0R2Z0 102 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 CRXO43186 299 aaPredicted RBP20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 CXorf1O96002 111 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 GCHFRP30047 84 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 STOML3Q8TAV4 291 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 IGF2BP2-AS1Q96M15 143 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 PPP1R14DQ9NXH3 145 aa20.28■□□□□ 0.84
SMARCC1-203ENST00000454240 TPT1P13693 172 aaKnown RBP20.26■□□□□ 0.83
SMARCC1-203ENST00000454240 MIFP14174 115 aa20.26■□□□□ 0.83
SMARCC1-203ENST00000454240 C1orf158Q8N1D5 194 aa20.26■□□□□ 0.83
SMARCC1-203ENST00000454240 Q8NAQ8 132 aa20.26■□□□□ 0.83
SMARCC1-203ENST00000454240 OTORQ9NRC9 128 aa20.26■□□□□ 0.83
SMARCC1-203ENST00000454240 CT45A10P0DMU9 189 aa20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 MUC7Q8TAX7 377 aa20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 LINC00477Q96M19 166 aa20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 ODF3Q96PU9 254 aa20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 NEU1Q99519 415 aa20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 C11orf68Q9H3H3 251 aaKnown RBP20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 TMEM167BQ9NRX6 74 aa20.25■□□□□ 0.83
SMARCC1-203ENST00000454240 PGPA6NDG6 321 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 CDKN1BP46527 198 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 CSN1S1P47710 185 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 ERCC8Q13216 396 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 ZFP69Q49AA0 526 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 C9orf47Q6ZRZ4 202 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 AGPAT4-IT1Q9H0P7 198 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 GOLT1BQ9Y3E0 138 aa20.24■□□□□ 0.83
SMARCC1-203ENST00000454240 TRAV12-2A0A075B6T6 113 aa20.23■□□□□ 0.83
SMARCC1-203ENST00000454240 IGKV2-40A0A087WW87 121 aaPredicted RBP20.23■□□□□ 0.83
SMARCC1-203ENST00000454240 UMAD1C9J7I0 102 aa20.23■□□□□ 0.83
SMARCC1-203ENST00000454240 IGKV2D-40P01614 121 aaPredicted RBP20.23■□□□□ 0.83
SMARCC1-203ENST00000454240 RXFP4Q8TDU9 374 aa20.23■□□□□ 0.83
SMARCC1-203ENST00000454240 IGHV4-28A0A0C4DH34 117 aa20.22■□□□□ 0.83
SMARCC1-203ENST00000454240 INSP01308 110 aa20.22■□□□□ 0.83
SMARCC1-203ENST00000454240 FAM74A1Q5RGS3 127 aa20.22■□□□□ 0.83
SMARCC1-203ENST00000454240 C9orf62Q8N4C0 152 aa20.22■□□□□ 0.83
SMARCC1-203ENST00000454240 IGHV3OR16-12A0A075B7B8 117 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 SMIM9A6NGZ8 99 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 RBMY1A1P0DJD3 496 aaKnown RBP20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 RBMY1CP0DJD4 496 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 TSPOP30536 169 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 FHITP49789 147 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 RBMY1FQ15415 496 aaKnown RBP20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 ARL6IP6Q8N6S5 226 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 TMED6Q8WW62 240 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 FAM19A4Q96LR4 140 aa20.21■□□□□ 0.83
SMARCC1-203ENST00000454240 VGLL1Q99990 258 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms