RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 STAG3L3P0CL85 134 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 HLA-DRB4P13762 266 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 RAB5CP51148 216 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 NUTF2P61970 127 aaKnown RBP6.44□□□□□ -1.38
COL28A1-205ENST00000453441 UBE2L3P68036 154 aaKnown RBP6.44□□□□□ -1.38
COL28A1-205ENST00000453441 PSG3Q16557 428 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 FAM122CQ6P4D5 195 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 APRG1Q8IVJ8 170 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 C9orf62Q8N4C0 152 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 RPP25LQ8N5L8 163 aaKnown RBP6.44□□□□□ -1.38
COL28A1-205ENST00000453441 FAM24BQ8N5W8 94 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 ARL6IP6Q8N6S5 226 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 SAT2Q96F10 170 aaPredicted RBP6.44□□□□□ -1.38
COL28A1-205ENST00000453441 C17orf77Q96MU5 243 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 LINC00052Q96N35 136 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 SH3BGRL3Q9H299 93 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 SAV1Q9H4B6 383 aaPredicted RBP6.44□□□□□ -1.38
COL28A1-205ENST00000453441 TMEM167BQ9NRX6 74 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 HLA-DRB4X5D2U9 266 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 H3BQ15 152 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 CXorf1O96002 111 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
COL28A1-205ENST00000453441 HOXA5P20719 270 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 ACTL10Q5JWF8 245 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 FAM74A1Q5RGS3 127 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 TRPT1Q86TN4 253 aaKnown RBP6.43□□□□□ -1.38
COL28A1-205ENST00000453441 ZNF738Q8NE65 137 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 PHYHIPLQ96FC7 376 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 SPATA25Q9BR10 227 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 C1QTNF4Q9BXJ3 329 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 WFDC10AQ9H1F0 79 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 ZMAT4Q9H898 229 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 ZNF586Q9NXT0 402 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 TP53TG1Q9Y2A0 90 aa6.43□□□□□ -1.38
COL28A1-205ENST00000453441 A0A0J9YX75 114 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 RBMY1BA6NDE4 496 aaKnown RBP6.42□□□□□ -1.38
COL28A1-205ENST00000453441 RBMY1EA6NEQ0 496 aaKnown RBP6.42□□□□□ -1.38
COL28A1-205ENST00000453441 H3BMM0 161 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 TEX46H3BTG2 121 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 AMBPP02760 352 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 RBMY1DP0C7P1 496 aaKnown RBP6.42□□□□□ -1.38
COL28A1-205ENST00000453441 PYYP10082 97 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 HAGHQ16775 308 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 Q6ZWC4 215 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 RXFP4Q8TDU9 374 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 TM2D3Q9BRN9 247 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 CSTL1Q9H114 145 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 DNAH9Q9NYC9 4486 aa6.42□□□□□ -1.38
COL28A1-205ENST00000453441 A8MTW9 85 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 SLC17A3O00476 420 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 NDUFB4O95168 129 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 OR10J4P0C629 311 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 ARL14EPLP0DKL9 152 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 GCHFRP30047 84 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 CSN1S1P47710 185 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 PPT1P50897 306 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 OR8A1Q8NGG7 326 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 OR10J6PQ8NGY7 276 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 SUN5Q8TC36 379 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 BLNKQ8WV28 456 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 TMED6Q8WW62 240 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 RPUSD4Q96CM3 377 aaKnown RBP6.41□□□□□ -1.38
COL28A1-205ENST00000453441 ZNF503Q96F45 646 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 ODF3Q96PU9 254 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 NKX6-2Q9C056 277 aaPredicted RBP6.41□□□□□ -1.38
COL28A1-205ENST00000453441 OTORQ9NRC9 128 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 RFNGQ9Y644 331 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 ARL2-SNX15V9GYD0 113 aa6.41□□□□□ -1.38
COL28A1-205ENST00000453441 SERTM2A0A1B0GWG4 89 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 A0A1W2PRE2 83 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 MAP1LC3B2A6NCE7 125 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 KNCNA6PVL3 124 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 RPL35AP18077 110 aaKnown RBP6.4□□□□□ -1.38
COL28A1-205ENST00000453441 CD300CQ08708 224 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 SBSPONQ8IVN8 264 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 RNF182Q8N6D2 247 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 C20orf173Q96LM9 149 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 TCEAL7Q9BRU2 100 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 MAP1LC3BQ9GZQ8 125 aa6.4□□□□□ -1.38
COL28A1-205ENST00000453441 AGRNO00468 2067 aa6.4□□□□□ -1.39
COL28A1-205ENST00000453441 TRBV7-9A0A0J9YWB2 115 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 RBAKDNA6NC62 111 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 FBLL1A6NHQ2 334 aaKnown RBP6.39□□□□□ -1.39
COL28A1-205ENST00000453441 H3BTX0 84 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 CA1P00915 261 aaPredicted RBP6.39□□□□□ -1.39
COL28A1-205ENST00000453441 HBE1P02100 147 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 SLC25A5P05141 298 aaKnown RBP6.39□□□□□ -1.39
COL28A1-205ENST00000453441 TSPOP30536 169 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 SULT1A2P50226 295 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 CNN1P51911 297 aaKnown RBP6.39□□□□□ -1.39
COL28A1-205ENST00000453441 RANP62826 216 aaKnown RBP6.39□□□□□ -1.39
COL28A1-205ENST00000453441 HIST1H1AQ02539 215 aaPredicted RBP6.39□□□□□ -1.39
COL28A1-205ENST00000453441 ICAM4Q14773 271 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 ZNF726P1Q15940 193 aa6.39□□□□□ -1.39
COL28A1-205ENST00000453441 OR4B1Q8NGF8 309 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms