RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 DEFB1P60022 68 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 RANP62826 216 aaKnown RBP8.77□□□□□ -1.01
LINC00339-205ENST00000452322 ICAM4Q14773 271 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 FAM74A1Q5RGS3 127 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 GDF5OSQ5U4N7 250 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 ALKAL2Q6UX46 152 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 TRPT1Q86TN4 253 aaKnown RBP8.77□□□□□ -1.01
LINC00339-205ENST00000452322 IQCF2Q8IXL9 164 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 EXOC3-AS1Q8N2X6 119 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 SFT2D1Q8WV19 159 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 RPUSD4Q96CM3 377 aaKnown RBP8.77□□□□□ -1.01
LINC00339-205ENST00000452322 Q9H3A6 140 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 ZNF705FA8MVS1 300 aaPredicted RBP8.76□□□□□ -1.01
LINC00339-205ENST00000452322 F6UB75 175 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 M0R3E3 92 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 OR8A1Q8NGG7 326 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 B9D2Q9BPU9 175 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 OTORQ9NRC9 128 aa8.76□□□□□ -1.01
LINC00339-205ENST00000452322 TRAV1-1A0A0B4J248 108 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 A0A1W2PRE2 83 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 TEX46H3BTG2 121 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
LINC00339-205ENST00000452322 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
LINC00339-205ENST00000452322 APOC4P55056 127 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 ARL6IP6Q8N6S5 226 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 KIR2DL5BQ8NHK3 375 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 AGRNO00468 2067 aa8.75□□□□□ -1.01
LINC00339-205ENST00000452322 PGPA6NDG6 321 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 A8MTW9 85 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 ZNF705EA8MWA4 302 aaPredicted RBP8.74□□□□□ -1.01
LINC00339-205ENST00000452322 PRAC2D3DTV9 90 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 HBE1P02100 147 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 CSN1S1P47710 185 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 CNN1P51911 297 aaKnown RBP8.74□□□□□ -1.01
LINC00339-205ENST00000452322 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
LINC00339-205ENST00000452322 HAGHQ16775 308 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
LINC00339-205ENST00000452322 OR4B1Q8NGF8 309 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 OR10J6PQ8NGY7 276 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 RXFP4Q8TDU9 374 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 ARL2-SNX15V9GYD0 113 aa8.74□□□□□ -1.01
LINC00339-205ENST00000452322 A0A1B0GV50 99 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 UBE2CO00762 179 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 ZNF705DP0CH99 300 aaPredicted RBP8.73□□□□□ -1.01
LINC00339-205ENST00000452322 ZNF705BP0CI00 300 aaPredicted RBP8.73□□□□□ -1.01
LINC00339-205ENST00000452322 PPT1P50897 306 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 NUTF2P61970 127 aaKnown RBP8.73□□□□□ -1.01
LINC00339-205ENST00000452322 TEX261Q6UWH6 196 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 SBSPONQ8IVN8 264 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 CMTM2Q8TAZ6 248 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 NKX6-2Q9C056 277 aaPredicted RBP8.73□□□□□ -1.01
LINC00339-205ENST00000452322 CSTL1Q9H114 145 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 FAM74A7A6NL05 159 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 NPIPB6E9PJ23 425 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 IGKV3-20P01619 116 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 PRB4P10163 310 aaPredicted RBP8.73□□□□□ -1.01
LINC00339-205ENST00000452322 UBE2G2P60604 165 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 BLOC1S1P78537 153 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 C5orf17Q8NAS9 161 aa8.73□□□□□ -1.01
LINC00339-205ENST00000452322 YTHDF2Q9Y5A9 579 aaKnown RBP8.73□□□□□ -1.01
LINC00339-205ENST00000452322 HUWE1Q7Z6Z7 4374 aaKnown RBP8.72□□□□□ -1.01
LINC00339-205ENST00000452322 RBAKDNA6NC62 111 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 CA1P00915 261 aaPredicted RBP8.72□□□□□ -1.01
LINC00339-205ENST00000452322 IFNA7P01567 189 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 SLC25A5P05141 298 aaKnown RBP8.72□□□□□ -1.01
LINC00339-205ENST00000452322 SUMO1P63165 101 aaKnown RBP8.72□□□□□ -1.01
LINC00339-205ENST00000452322 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 ZNF680Q8NEM1 530 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 ASCL2Q99929 193 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
LINC00339-205ENST00000452322 IGKV2-40A0A087WW87 121 aaPredicted RBP8.71□□□□□ -1.02
LINC00339-205ENST00000452322 SERTM2A0A1B0GWG4 89 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 IGKV2D-40P01614 121 aaPredicted RBP8.71□□□□□ -1.02
LINC00339-205ENST00000452322 CCL20P78556 96 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 PMS2P11Q13670 270 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 C9orf47Q6ZRZ4 202 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 Q6ZWC4 215 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 TCEAL7Q9BRU2 100 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 C1QTNF4Q9BXJ3 329 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 SLC35B3Q9H1N7 401 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
LINC00339-205ENST00000452322 PAGE4O60829 102 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 AMBPP02760 352 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 TCRAP04437 139 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-205ENST00000452322 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-205ENST00000452322 GNG5P63218 68 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 ERCC8Q13216 396 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
LINC00339-205ENST00000452322 CST9LP1Q5W188 147 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms