RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 IGHV3-23P01764 117 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 LINC00310P59036 64 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 UBE2G1P62253 170 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 Q71RC1 249 aaPredicted RBP9.52□□□□□ -0.89
COL27A1-202ENST00000451716 ITLN2Q8WWU7 325 aaPredicted RBP9.52□□□□□ -0.89
COL27A1-202ENST00000451716 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.89
COL27A1-202ENST00000451716 PRORYQ9H606 182 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
COL27A1-202ENST00000451716 IGSF10Q6WRI0 2623 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 HOXB4P17483 251 aaPredicted RBP9.51□□□□□ -0.89
COL27A1-202ENST00000451716 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 EXOC3-AS1Q8N2X6 119 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 SIGLECL1Q8N7X8 197 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 Q9H3A6 140 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 NRN1Q9NPD7 142 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 MYO18BQ8IUG5 2567 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 NDUFA3O95167 84 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 CRISP2P16562 243 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 ASCL2Q99929 193 aa9.51□□□□□ -0.89
COL27A1-202ENST00000451716 TRAV9-1A0A075B6T8 112 aa9.5□□□□□ -0.89
COL27A1-202ENST00000451716 NPBQ8NG41 125 aa9.5□□□□□ -0.89
COL27A1-202ENST00000451716 CITED2Q99967 270 aaPredicted RBP9.5□□□□□ -0.89
COL27A1-202ENST00000451716 BPESC1Q9GZL8 116 aa9.5□□□□□ -0.89
COL27A1-202ENST00000451716 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
COL27A1-202ENST00000451716 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
COL27A1-202ENST00000451716 SMIM27A0A1W2PRY6 76 aa9.5□□□□□ -0.89
COL27A1-202ENST00000451716 LINC00322Q6ZN03 302 aaPredicted RBP9.5□□□□□ -0.89
COL27A1-202ENST00000451716 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 FAM120AOSQ5T036 256 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 TMEM136Q6ZRR5 245 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
COL27A1-202ENST00000451716 IL4P05112 153 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 BAGE3Q86Y29 109 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 FANCD2OSQ96PS1 177 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 C5orf47Q569G3 176 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 ARPC1AQ92747 370 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 HSPB8Q9UJY1 196 aa9.49□□□□□ -0.89
COL27A1-202ENST00000451716 USP9XQ93008 2570 aaPredicted RBP9.48□□□□□ -0.89
COL27A1-202ENST00000451716 CD5LO43866 347 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 TCRAP04437 139 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
COL27A1-202ENST00000451716 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 C7orf69Q9H7B7 122 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 GNB4Q9HAV0 340 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 IGHV3OR16-8A0A075B7F1 116 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 ZNF253O75346 499 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
COL27A1-202ENST00000451716 EFNA4P52798 201 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 ZNF491Q8N8L2 437 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 NUP35Q8NFH5 326 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 RAX2Q96IS3 184 aa9.48□□□□□ -0.89
COL27A1-202ENST00000451716 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 SH2D7A6NKC9 451 aaPredicted RBP9.47□□□□□ -0.89
COL27A1-202ENST00000451716 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 RNF125Q96EQ8 232 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 GPR82Q96P67 336 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 SPATA25Q9BR10 227 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
COL27A1-202ENST00000451716 TPPP3Q9BW30 176 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 IZUMO1RA6ND01 250 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 HIGD1CA8MV81 97 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 OR2J3O76001 311 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 AMY1AP04745 511 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 VPREB3Q9UKI3 123 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
COL27A1-202ENST00000451716 C7orf71A4D174 169 aa9.46□□□□□ -0.89
COL27A1-202ENST00000451716 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.89
COL27A1-202ENST00000451716 SRIP30626 198 aa9.46□□□□□ -0.89
COL27A1-202ENST00000451716 CAMPP49913 170 aa9.46□□□□□ -0.89
COL27A1-202ENST00000451716 Q56UQ5 140 aa9.46□□□□□ -0.89
COL27A1-202ENST00000451716 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.89
COL27A1-202ENST00000451716 CIARTQ8N365 385 aaPredicted RBP9.46□□□□□ -0.89
COL27A1-202ENST00000451716 ZNF418Q8TF45 676 aaPredicted RBP9.46□□□□□ -0.89
COL27A1-202ENST00000451716 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.89
COL27A1-202ENST00000451716 ABCA2Q9BZC7 2435 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 IGLV11-55A0A075B6I3 123 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 IGHV3OR16-10A0A075B7F0 116 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 BMPR1BO00238 502 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 LMO4P61968 165 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 PRNTQ86SH4 94 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 Q8N6K4 173 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 AP1S3Q96PC3 154 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 RCHY1Q96PM5 261 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 SHANK2-AS3Q9BTD1 123 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
COL27A1-202ENST00000451716 ZNF331Q9NQX6 463 aaPredicted RBP9.46□□□□□ -0.9
COL27A1-202ENST00000451716 TRBV9A0A0B4J1U6 114 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 F8W735 103 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-202ENST00000451716 K7EP34 96 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 SCGB2A1O75556 95 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms