RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 RBKSQ9H477 322 aa7.1□□□□□ -1.27
LINC01238-204ENST00000451070 HSPB7Q9UBY9 170 aa7.1□□□□□ -1.27
LINC01238-204ENST00000451070 HLA-DRB4X5D2U9 266 aa7.1□□□□□ -1.27
LINC01238-204ENST00000451070 IGKV1D-37A0A075B6S9 117 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 A0A0B4J2A0 478 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 CXCL2P19875 107 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 NKX2-1P43699 371 aaPredicted RBP7.09□□□□□ -1.27
LINC01238-204ENST00000451070 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
LINC01238-204ENST00000451070 ZNF90Q03938 601 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 SLAQ13239 276 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 AKR1C8PQ5T2L2 129 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 ZNF705AQ6ZN79 300 aaPredicted RBP7.09□□□□□ -1.27
LINC01238-204ENST00000451070 TMUB2Q71RG4 321 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 LYZL2Q7Z4W2 148 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 LGI3Q8N145 548 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 OR2T35Q8NGX2 323 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 ORAOV1Q8WV07 137 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 ATG101Q9BSB4 218 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 CACFD1Q9UGQ2 172 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 SHPKQ9UHJ6 478 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 PKHD1P08F94 4074 aa7.09□□□□□ -1.27
LINC01238-204ENST00000451070 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
LINC01238-204ENST00000451070 SOCS3O14543 225 aa7.08□□□□□ -1.28
LINC01238-204ENST00000451070 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
LINC01238-204ENST00000451070 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
LINC01238-204ENST00000451070 RAB5AP20339 215 aa7.08□□□□□ -1.28
LINC01238-204ENST00000451070 ERVFC1-1P60608 527 aa7.08□□□□□ -1.28
LINC01238-204ENST00000451070 KLF9Q13886 244 aaPredicted RBP7.08□□□□□ -1.28
LINC01238-204ENST00000451070 JOSD1Q15040 202 aaPredicted RBP7.08□□□□□ -1.28
LINC01238-204ENST00000451070 PBDC1Q9BVG4 233 aa7.08□□□□□ -1.28
LINC01238-204ENST00000451070 GSKIPQ9P0R6 139 aa7.08□□□□□ -1.28
LINC01238-204ENST00000451070 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
LINC01238-204ENST00000451070 DNAH11Q96DT5 4516 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 A0A1B0GV72 72 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 C20orf202A1L168 122 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 ZFP92A6NM28 416 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 PITX3O75364 302 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 GCGP01275 180 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 IGKV3-20P01619 116 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 AKR1C4P17516 323 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 CAMLGP49069 296 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 FXYD7P58549 80 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 RPL19P84098 196 aaKnown RBP7.07□□□□□ -1.28
LINC01238-204ENST00000451070 ALKAL2Q6UX46 152 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 POM121L12Q8N7R1 296 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 ZNF709Q8N972 641 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 SCGB3A2Q96PL1 93 aa7.07□□□□□ -1.28
LINC01238-204ENST00000451070 PKD1P98161 4303 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 IGKV1OR2-108A0A075B7D4 117 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 A0A0D9SG52 128 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 IFITM10A6NMD0 228 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 CXCL3P19876 107 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 PSMB3P49720 205 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 ATP5IP56385 69 aaPredicted RBP7.06□□□□□ -1.28
LINC01238-204ENST00000451070 LYZP61626 148 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 TMEM241Q24JQ0 296 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 FOXI2Q6ZQN5 318 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 LINC00336Q6ZUF6 198 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 OR10D4PQ8NGN7 298 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 SLC35E1Q96K37 410 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 C17orf77Q96MU5 243 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 PRO1933Q9H354 126 aa7.06□□□□□ -1.28
LINC01238-204ENST00000451070 IGHV3OR16-12A0A075B7B8 117 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 SMIM9A6NGZ8 99 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 F6UB75 175 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 RTL8CO15255 209 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 SIX6O95475 246 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 SNRPCP09234 159 aaKnown RBP7.05□□□□□ -1.28
LINC01238-204ENST00000451070 P0DMU3 169 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 FAM231AP0DMU4 169 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 FAM231CP0DMU5 169 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 ADCYAP1P18509 176 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 ID1P41134 155 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 EMP1P54849 157 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 PAX9P55771 341 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 SRPXP78539 464 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 OR2F1Q13607 317 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 C1orf194Q5T5A4 169 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 LINC01551Q86U37 167 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 THAP8Q8NA92 274 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 OR4B1Q8NGF8 309 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 TRGV9Q99603 122 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 VPS25Q9BRG1 176 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 DNAJC4Q9NNZ3 241 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 DKK2Q9UBU2 259 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
LINC01238-204ENST00000451070 MUC4Q99102 2169 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 A0A0J9YX75 114 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 DUXBA0A1W2PPF3 345 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 TMEM189A5PLL7 270 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 SNRPGP15A8MWD9 76 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 PRSS46E5RG02 174 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 M0R2N4 97 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 PPP1R2P9O14990 202 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 GHRHP01286 108 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 TCRBP04435 133 aa7.04□□□□□ -1.28
LINC01238-204ENST00000451070 SPART-AS1P0CW21 52 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms