RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 NEU1Q99519 415 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 SH3BGRL3Q9H299 93 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 X6R8D5 127 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 A0A0D9SG52 128 aa10.41□□□□□ -0.74
COL3A1-203ENST00000450867 ZNF705FA8MVS1 300 aaPredicted RBP10.41□□□□□ -0.74
COL3A1-203ENST00000450867 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
COL3A1-203ENST00000450867 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
COL3A1-203ENST00000450867 ZNF705DP0CH99 300 aaPredicted RBP10.41□□□□□ -0.74
COL3A1-203ENST00000450867 ZNF705BP0CI00 300 aaPredicted RBP10.41□□□□□ -0.74
COL3A1-203ENST00000450867 MIFP14174 115 aa10.41□□□□□ -0.74
COL3A1-203ENST00000450867 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
COL3A1-203ENST00000450867 DYNC2H1Q8NCM8 4307 aaKnown RBP10.41□□□□□ -0.74
COL3A1-203ENST00000450867 A0A0J9YWU9 116 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 NPIPB6E9PJ23 425 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 CRXO43186 299 aaPredicted RBP10.4□□□□□ -0.74
COL3A1-203ENST00000450867 OR10J4P0C629 311 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 STAG3L2P0CL84 134 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 STAG3L3P0CL85 134 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 CDC34P49427 236 aaPredicted RBP10.4□□□□□ -0.74
COL3A1-203ENST00000450867 UBE2L3P68036 154 aaKnown RBP10.4□□□□□ -0.74
COL3A1-203ENST00000450867 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.74
COL3A1-203ENST00000450867 IL17DQ8TAD2 202 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 BLNKQ8WV28 456 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 PHYHIPLQ96FC7 376 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 ARPC5LQ9BPX5 153 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 AAMDCQ9H7C9 122 aa10.4□□□□□ -0.74
COL3A1-203ENST00000450867 BOLA2-SMG1P6H3BVE0 249 aa10.39□□□□□ -0.75
COL3A1-203ENST00000450867 M0R3E3 92 aa10.39□□□□□ -0.75
COL3A1-203ENST00000450867 FAM122CQ6P4D5 195 aa10.39□□□□□ -0.75
COL3A1-203ENST00000450867 OR10J6PQ8NGY7 276 aa10.39□□□□□ -0.75
COL3A1-203ENST00000450867 RAB24Q969Q5 203 aa10.39□□□□□ -0.75
COL3A1-203ENST00000450867 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 BCL2L11O43521 198 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 ICAM4Q14773 271 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 EXOC3-AS1Q8N2X6 119 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 ARL6IP6Q8N6S5 226 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 LYSTQ99698 3801 aa10.38□□□□□ -0.75
COL3A1-203ENST00000450867 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 M0R2Z0 102 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 C1QBP02746 253 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 FXYD7P58549 80 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 C9orf47Q6ZRZ4 202 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 ACTR3CQ9C0K3 210 aaPredicted RBP10.37□□□□□ -0.75
COL3A1-203ENST00000450867 Q9H3A6 140 aa10.37□□□□□ -0.75
COL3A1-203ENST00000450867 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL3A1-203ENST00000450867 INSP01308 110 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 SEC11BP0C7V7 166 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
COL3A1-203ENST00000450867 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 CDKN1BP46527 198 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
COL3A1-203ENST00000450867 ZNF726P1Q15940 193 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 SSX7Q7RTT5 188 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 FAM19A4Q96LR4 140 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 OTORQ9NRC9 128 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 GOLT1BQ9Y3E0 138 aa10.36□□□□□ -0.75
COL3A1-203ENST00000450867 KMT2CQ8NEZ4 4911 aaKnown RBP10.36□□□□□ -0.75
COL3A1-203ENST00000450867 CTXND1A0A1B0GTU2 59 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 SLC25A5P05141 298 aaKnown RBP10.35□□□□□ -0.75
COL3A1-203ENST00000450867 CT45A10P0DMU9 189 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 TSPOP30536 169 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 RANP62826 216 aaKnown RBP10.35□□□□□ -0.75
COL3A1-203ENST00000450867 TMUB2Q71RG4 321 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 AKAP14Q86UN6 197 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 C20orf144Q9BQM9 153 aa10.35□□□□□ -0.75
COL3A1-203ENST00000450867 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
COL3A1-203ENST00000450867 CXorf1O96002 111 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 NMBP08949 121 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 PRB4P10163 310 aaPredicted RBP10.34□□□□□ -0.75
COL3A1-203ENST00000450867 GCHFRP30047 84 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 EIF5AP63241 154 aaKnown RBP10.34□□□□□ -0.75
COL3A1-203ENST00000450867 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
COL3A1-203ENST00000450867 AKR1C8PQ5T2L2 129 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 BAP18Q8IXM2 172 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 STOML3Q8TAV4 291 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 HYLS1Q96M11 299 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 ZNF471Q9BX82 626 aaPredicted RBP10.34□□□□□ -0.75
COL3A1-203ENST00000450867 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 PPP1R14DQ9NXH3 145 aa10.34□□□□□ -0.75
COL3A1-203ENST00000450867 hCG_2014768A0A024R1R8 64 aa10.33□□□□□ -0.76
COL3A1-203ENST00000450867 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
COL3A1-203ENST00000450867 CRISP2P16562 243 aa10.33□□□□□ -0.76
COL3A1-203ENST00000450867 LEPP41159 167 aa10.33□□□□□ -0.76
COL3A1-203ENST00000450867 PLECQ15149 4684 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms