RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 PAX4O43316 350 aa10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 H3BRN7 92 aa10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 FAM104BQ5XKR9 115 aa10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 MED12Q93074 2177 aa10.6□□□□□ -0.71
SMARCA4-205ENST00000450717 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 CD5LO43866 347 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 LCNL1Q6ZST4 164 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 THAP8Q8NA92 274 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 POU2AF1Q16633 256 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 PRR30Q53SZ7 412 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 UBE2DNLQ8IWF7 75 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 FANCMQ8IYD8 2048 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 V9GYV3 84 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 PHF3Q92576 2039 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 CYYR1Q96J86 154 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 WIPF3A6NGB9 483 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 RPL35AP18077 110 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 IL15RAQ13261 267 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 DLX4Q92988 240 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 C8orf49Q96NF6 230 aa10.59□□□□□ -0.71
SMARCA4-205ENST00000450717 LEPROTO15243 131 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 DUX4L9Q6RFH8 374 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 C8orf31Q8N9H6 132 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 POLR3KQ9Y2Y1 108 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 RNF114Q9Y508 228 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 HAPLN4Q86UW8 402 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 LY6G5BQ8NDX9 201 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 TIMM21Q9BVV7 248 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 RUSC1-AS1Q66K80 236 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 Q8N8P6 123 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 KAAG1Q9UBP8 84 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 NPC2P61916 151 aa10.58□□□□□ -0.72
SMARCA4-205ENST00000450717 TMEM213A2RRL7 107 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 IGHV3-53P01767 116 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 WT1-ASQ06250 92 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 UBE2V1Q13404 147 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 A0A087WWL8 130 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 A8MWP6 167 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 ZNF134P52741 427 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 TMEM141Q96I45 108 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 RNF138Q8WVD3 245 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 KIAA1671Q9BY89 1806 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 NUP210Q8TEM1 1887 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 FAM215AQ9Y5M1 114 aa10.57□□□□□ -0.72
SMARCA4-205ENST00000450717 HELZP42694 1942 aaKnown RBP10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 RHODO00212 210 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 NDUFA4O00483 81 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 ESDP10768 282 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 SS18Q15532 418 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 C2orf82Q6UX34 121 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 GAGE2BQ13066 116 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 LURAP1LQ8IV03 231 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
SMARCA4-205ENST00000450717 ZFAND6Q6FIF0 208 aa10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 PRR25Q96S07 402 aa10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 DEFB131AP59861 70 aa10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 UBE2E2Q96LR5 201 aa10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
SMARCA4-205ENST00000450717 K7EM74 188 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 KRTAP27-1Q3LI81 207 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 Q6ZSR3 168 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 LINC01619G3V211 115 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 SSBP2P81877 361 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 PRR20EP86478 221 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 PRR20CP86479 221 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 PRR20DP86480 221 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 PRR20BP86481 221 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 PRR20AP86496 221 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 PIP4P1Q86T03 277 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 IGHV2-5P01817 119 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 VWC2Q2TAL6 325 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 RTTNQ86VV8 2226 aa10.54□□□□□ -0.72
SMARCA4-205ENST00000450717 J3QLI3 93 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 G3V318 75 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 MMP23AO75900 390 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
SMARCA4-205ENST00000450717 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms