RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 TMEM167AQ8TBQ9 72 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 DSCAMO60469 2012 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 AHCTF1Q8WYP5 2266 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 RPL32P62910 135 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 MBNL2Q5VZF2 373 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 DUX4L9Q6RFH8 374 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 C17orf77Q96MU5 243 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 EYSQ5T1H1 3165 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 APELAP0DMC3 54 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 ZNF71Q9NQZ8 489 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 DSCAML1Q8TD84 2053 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 A0A1W2PPI3 338 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 LINC01549A6NIU2 74 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE7O76087 117 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 MEOX1P50221 254 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE4Q13068 117 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 LINC01559Q495D7 138 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 DEFB108BQ8NET1 73 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 NDUFA3O95167 84 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 RPUSD1Q9UJJ7 312 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-204ENST00000448416 ICE1Q9Y2F5 2266 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 TMEM262E9PQX1 116 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 CLEC3BP05452 202 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 NHLRC4P0CG21 123 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 H3BVH4 76 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 M0R3E3 92 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 SH2D1AO60880 128 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 OR4C13Q8NGP0 309 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 DEFB127Q9H1M4 99 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 LINC01548A6NM66 108 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE2BQ13066 116 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE2EQ4V326 116 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 TMEM133Q9H2Q1 129 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 GAGE2DQ9UEU5 116 aa7.42□□□□□ -1.22
SYNPO2-204ENST00000448416 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 SPRNQ5BIV9 151 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 NGBQ9NPG2 151 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 A8MWV9 139 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 CECR9P0C854 216 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 KIR2DL4Q99706 377 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 SCNM1Q9BWG6 230 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 PRUNE2Q8WUY3 3088 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 TTC32Q5I0X7 151 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 ZNF833PQ6ZTB9 187 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 MYMXA0A1B0GTQ4 84 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 MSRB1Q9NZV6 116 aa7.41□□□□□ -1.22
SYNPO2-204ENST00000448416 IGKV3-15P01624 115 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 NDUFV3P56181 108 aaKnown RBP7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 SIGLEC15Q6ZMC9 328 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 FBXL15Q9H469 300 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 RHODO00212 210 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 SNCGO76070 127 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 THBDP07204 575 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 CCL13Q99616 98 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 TPSG1Q9NRR2 321 aa7.4□□□□□ -1.22
SYNPO2-204ENST00000448416 SPRY3O43610 288 aa7.4□□□□□ -1.23
SYNPO2-204ENST00000448416 GATA1P15976 413 aaPredicted RBP7.4□□□□□ -1.23
SYNPO2-204ENST00000448416 DIAPH2-AS1Q14236 149 aa7.4□□□□□ -1.23
SYNPO2-204ENST00000448416 VMA21Q3ZAQ7 101 aa7.4□□□□□ -1.23
SYNPO2-204ENST00000448416 SAP25Q8TEE9 199 aa7.4□□□□□ -1.23
SYNPO2-204ENST00000448416 CITED1Q99966 193 aa7.4□□□□□ -1.23
SYNPO2-204ENST00000448416 A0A087WX48 190 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 ARL3P36405 182 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 CADP27708 2225 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 LINC01619G3V211 115 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 SRD5A1P18405 259 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 PLNP26678 52 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 CNEP1R1Q8N9A8 125 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 RASL11BQ9BPW5 248 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 TGFAP01135 160 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 EGR2P11161 476 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 LYPD1Q8N2G4 141 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 ANKRD29Q8N6D5 301 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 FAM216BQ8N7L0 139 aa7.39□□□□□ -1.23
SYNPO2-204ENST00000448416 K7ESF4 209 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 PRTN3P24158 256 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 CCL11P51671 97 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 PLGLAQ15195 96 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 Q8N8P6 123 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 RAX2Q96IS3 184 aa7.38□□□□□ -1.23
SYNPO2-204ENST00000448416 AAMDCQ9H7C9 122 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms