RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 IGKV1-39P01597 117 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 IGKV1D-39P04432 117 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 RLN1P04808 185 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 PFN1P07737 140 aaKnown RBP1.93□□□□□ -2.1
PMS1-215ENST00000447232 HRH1P35367 487 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 OR10A3P58181 314 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 C2orf76Q3KRA6 126 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 FAM162BQ5T6X4 162 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 OR4D5Q8NGN0 318 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 DPH3Q96FX2 82 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 IGKV1D-37A0A075B6S9 117 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 A0A1B0GUV1 79 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 PRSS47A8MTI9 375 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 PGLYRP1O75594 196 aaPredicted RBP1.93□□□□□ -2.1
PMS1-215ENST00000447232 GADD45AP24522 165 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 HTR2BP41595 481 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 CCR6P51684 374 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 VWC2Q2TAL6 325 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 ASB16-AS1Q495Z4 193 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 IDNKQ5T6J7 187 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 EIF4E3Q8N5X7 224 aaKnown RBP1.93□□□□□ -2.1
PMS1-215ENST00000447232 SLC35G3Q8N808 338 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 OR5H2Q8NGV7 314 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 FAM3DQ96BQ1 224 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 SLC25A38Q96DW6 304 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 C2orf50Q96LR7 162 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 GTSF1LQ9H1H1 148 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 MED4Q9NPJ6 270 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 RAB22AQ9UL26 194 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 LINC00854A0A1B0GVQ3 168 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 PTHLHP12272 177 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 ZNF90Q03938 601 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 H2BFWTQ7Z2G1 175 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 C10orf67Q8IYJ2 551 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 ARRDC1Q8N5I2 433 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 TSPAN14Q8NG11 270 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 RHOXF1Q8NHV9 184 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 RNASEH2CQ8TDP1 164 aaKnown RBP1.92□□□□□ -2.1
PMS1-215ENST00000447232 TMEM170AQ8WVE7 144 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 RASL10AQ92737 203 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 RPUSD4Q96CM3 377 aaKnown RBP1.92□□□□□ -2.1
PMS1-215ENST00000447232 ODF3Q96PU9 254 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 PLGRKTQ9HBL7 147 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 TCRBV3S1A0A5B6 114 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 HMGB1P1B2RPK0 211 aaPredicted RBP1.92□□□□□ -2.1
PMS1-215ENST00000447232 KRTAP1-4P0C5Y4 121 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 FXYD4P59646 89 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 KRTAP10-5P60370 271 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 LYZP61626 148 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 IZUMO4Q1ZYL8 232 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 C2orf83Q53S99 150 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 STEAP1BQ6NZ63 245 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 CCDC190Q86UF4 302 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 NIT1Q86X76 327 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 INO80EQ8NBZ0 244 aaPredicted RBP1.92□□□□□ -2.1
PMS1-215ENST00000447232 OR10P1Q8NGE3 313 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 CCDC124Q96CT7 223 aaKnown RBP1.92□□□□□ -2.1
PMS1-215ENST00000447232 GPR82Q96P67 336 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 KLK12Q9UKR0 248 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 TP53TG3Q9ULZ0 132 aa1.92□□□□□ -2.1
PMS1-215ENST00000447232 TRAV4A0A0B4J268 109 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 J3KRW8 73 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 SSX5O60225 188 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 UCHL1P09936 223 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 SEC11BP0C7V7 166 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 CT45A10P0DMU9 189 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 RPS25P62851 125 aaKnown RBP1.91□□□□□ -2.1
PMS1-215ENST00000447232 ARL6IP1Q15041 203 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 ETFRF1Q6IPR1 90 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 TMEM17Q86X19 198 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 TMEM75Q8N9X5 138 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 OR10G9Q8NGN4 311 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 LYPD6BQ8NI32 183 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 APH1BQ8WW43 257 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 BORCS5Q969J3 196 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 MRGPRFQ96AM1 343 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 UBE2WQ96B02 151 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 ACY3Q96HD9 319 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 TMEM222Q9H0R3 208 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 SLC25A22Q9H936 323 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 DIMT1Q9UNQ2 313 aaKnown RBP1.91□□□□□ -2.1
PMS1-215ENST00000447232 TMEM56-RWDD3S4R434 201 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 A0A087X0K7 114 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 C7orf71A4D174 169 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 FABP12A6NFH5 140 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 SNRPGP15A8MWD9 76 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 KLLNB2CW77 178 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 SLC25A5P05141 298 aaKnown RBP1.91□□□□□ -2.1
PMS1-215ENST00000447232 OR10J4P0C629 311 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 LEPP41159 167 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 CBX5P45973 191 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 TMEM183BQ1AE95 376 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 CDNFQ49AH0 187 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 TMEM183AQ8IXX5 376 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 STPG4Q8N801 248 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 LINC00479Q96M42 142 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 OR51M1Q9H341 326 aa1.91□□□□□ -2.1
PMS1-215ENST00000447232 AK6Q9Y3D8 172 aaKnown RBP1.91□□□□□ -2.1
PMS1-215ENST00000447232 PRAC2D3DTV9 90 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms