RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 AAMDCQ9H7C9 122 aa13.35□□□□□ -0.27
PHTF1-207ENST00000446739 SPRY2O43597 315 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
PHTF1-207ENST00000446739 IGKV3-20P01619 116 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 SEC11BP0C7V7 166 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 STAG3L2P0CL84 134 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 STAG3L3P0CL85 134 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 C4BPBP20851 252 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 CD300CQ08708 224 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 ZFP69Q49AA0 526 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 OR8A1Q8NGG7 326 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 C1QTNF4Q9BXJ3 329 aa13.34□□□□□ -0.27
PHTF1-207ENST00000446739 ZNF705FA8MVS1 300 aaPredicted RBP13.33□□□□□ -0.28
PHTF1-207ENST00000446739 HMGB3O15347 200 aaKnown RBP13.33□□□□□ -0.28
PHTF1-207ENST00000446739 GIG44P09565 113 aaPredicted RBP13.33□□□□□ -0.28
PHTF1-207ENST00000446739 TPT1P13693 172 aaKnown RBP13.33□□□□□ -0.28
PHTF1-207ENST00000446739 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
PHTF1-207ENST00000446739 BAP18Q8IXM2 172 aa13.33□□□□□ -0.28
PHTF1-207ENST00000446739 LYPD1Q8N2G4 141 aa13.33□□□□□ -0.28
PHTF1-207ENST00000446739 STOML3Q8TAV4 291 aa13.33□□□□□ -0.28
PHTF1-207ENST00000446739 PHYHIPLQ96FC7 376 aa13.33□□□□□ -0.28
PHTF1-207ENST00000446739 ZNF705DP0CH99 300 aaPredicted RBP13.32□□□□□ -0.28
PHTF1-207ENST00000446739 ZNF705BP0CI00 300 aaPredicted RBP13.32□□□□□ -0.28
PHTF1-207ENST00000446739 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
PHTF1-207ENST00000446739 HIST1H1AQ02539 215 aaPredicted RBP13.32□□□□□ -0.28
PHTF1-207ENST00000446739 CTXND1A0A1B0GTU2 59 aa13.31□□□□□ -0.28
PHTF1-207ENST00000446739 CXorf1O96002 111 aa13.31□□□□□ -0.28
PHTF1-207ENST00000446739 ICAM4Q14773 271 aa13.31□□□□□ -0.28
PHTF1-207ENST00000446739 EXOC3-AS1Q8N2X6 119 aa13.31□□□□□ -0.28
PHTF1-207ENST00000446739 OR10J6PQ8NGY7 276 aa13.31□□□□□ -0.28
PHTF1-207ENST00000446739 UMAD1C9J7I0 102 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 PRAC2D3DTV9 90 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 M0R3E3 92 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 AMTNQ6UX39 209 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 SLC35B3Q9H1N7 401 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 Q9H3A6 140 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
PHTF1-207ENST00000446739 AMBPP02760 352 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 GCHFRP30047 84 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 RANP62826 216 aaKnown RBP13.29□□□□□ -0.28
PHTF1-207ENST00000446739 ZNF726P1Q15940 193 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 SLC51BQ86UW2 128 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 CSNK1G2-AS1Q8NCQ2 148 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 TMEM167BQ9NRX6 74 aa13.29□□□□□ -0.28
PHTF1-207ENST00000446739 FXYD7P58549 80 aa13.28□□□□□ -0.28
PHTF1-207ENST00000446739 FAM74A1Q5RGS3 127 aa13.28□□□□□ -0.28
PHTF1-207ENST00000446739 EIF5AL1Q6IS14 154 aaKnown RBP13.28□□□□□ -0.28
PHTF1-207ENST00000446739 RARRES2Q99969 163 aa13.28□□□□□ -0.28
PHTF1-207ENST00000446739 PPP1R14DQ9NXH3 145 aa13.28□□□□□ -0.28
PHTF1-207ENST00000446739 NPIPB6E9PJ23 425 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 BOLA2-SMG1P6H3BVE0 249 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 PRB4P10163 310 aaPredicted RBP13.27□□□□□ -0.29
PHTF1-207ENST00000446739 CSN1S1P47710 185 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 DPPA3Q6W0C5 159 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 OR11H2Q8NH07 326 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 TMED6Q8WW62 240 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 WWC2-AS2Q96NR7 200 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 OTORQ9NRC9 128 aa13.27□□□□□ -0.29
PHTF1-207ENST00000446739 RXFP4Q8TDU9 374 aa13.26□□□□□ -0.29
PHTF1-207ENST00000446739 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
PHTF1-207ENST00000446739 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 PGPA6NDG6 321 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 ZNF705EA8MWA4 302 aaPredicted RBP13.25□□□□□ -0.29
PHTF1-207ENST00000446739 SPINK13Q1W4C9 94 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 ARL6IP6Q8N6S5 226 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 CMTM2Q8TAZ6 248 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 IGF2BP2-AS1Q96M15 143 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 ODF3Q96PU9 254 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 EDA2RQ9HAV5 297 aa13.25□□□□□ -0.29
PHTF1-207ENST00000446739 M0R2Z0 102 aa13.24□□□□□ -0.29
PHTF1-207ENST00000446739 TSPOP30536 169 aa13.24□□□□□ -0.29
PHTF1-207ENST00000446739 CDKN1BP46527 198 aa13.24□□□□□ -0.29
PHTF1-207ENST00000446739 FHITP49789 147 aa13.24□□□□□ -0.29
PHTF1-207ENST00000446739 FAM213BQ8TBF2 198 aa13.24□□□□□ -0.29
PHTF1-207ENST00000446739 LINC00477Q96M19 166 aa13.24□□□□□ -0.29
PHTF1-207ENST00000446739 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
PHTF1-207ENST00000446739 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
PHTF1-207ENST00000446739 INSP01308 110 aa13.23□□□□□ -0.29
PHTF1-207ENST00000446739 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
PHTF1-207ENST00000446739 SLC25A5P05141 298 aaKnown RBP13.23□□□□□ -0.29
PHTF1-207ENST00000446739 RAB5CP51148 216 aa13.23□□□□□ -0.29
PHTF1-207ENST00000446739 FGF8P55075 233 aaPredicted RBP13.23□□□□□ -0.29
PHTF1-207ENST00000446739 ZNF705AQ6ZN79 300 aaPredicted RBP13.23□□□□□ -0.29
PHTF1-207ENST00000446739 C9orf47Q6ZRZ4 202 aa13.23□□□□□ -0.29
PHTF1-207ENST00000446739 MBD3L1Q8WWY6 194 aa13.23□□□□□ -0.29
PHTF1-207ENST00000446739 GOLT1BQ9Y3E0 138 aa13.23□□□□□ -0.29
PHTF1-207ENST00000446739 DIRC3C9JPN6 131 aa13.22□□□□□ -0.29
PHTF1-207ENST00000446739 CRXO43186 299 aaPredicted RBP13.22□□□□□ -0.29
PHTF1-207ENST00000446739 CT45A10P0DMU9 189 aa13.22□□□□□ -0.29
PHTF1-207ENST00000446739 MIFP14174 115 aa13.22□□□□□ -0.29
PHTF1-207ENST00000446739 LEPP41159 167 aa13.22□□□□□ -0.29
PHTF1-207ENST00000446739 NKX2-5P52952 324 aaPredicted RBP13.22□□□□□ -0.29
PHTF1-207ENST00000446739 ERCC8Q13216 396 aa13.22□□□□□ -0.29
PHTF1-207ENST00000446739 TMEM78Q5T7P6 136 aa13.22□□□□□ -0.29
PHTF1-207ENST00000446739 NEU1Q99519 415 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms