RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 LOXP28300 417 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-204ENST00000446349 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 FAM215AQ9Y5M1 114 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 INSL3P51460 131 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 OR11H6Q8NGC7 330 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 ST6GALNAC6Q969X2 333 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 DERL1Q9BUN8 251 aa6.88□□□□□ -1.31
PTPN3-204ENST00000446349 C15orf62A8K5M9 175 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 PAX4O43316 350 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 SRSF4Q08170 494 aaKnown RBP6.87□□□□□ -1.31
PTPN3-204ENST00000446349 NIT1Q86X76 327 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 DSCAMO60469 2012 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 CD300CQ08708 224 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 LRRC75A-AS1Q8N1F1 130 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 PROK2Q9HC23 129 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 HSD52Q0P140 79 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 POU2AF1Q16633 256 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 TRAV25A0A0B4J276 109 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 CCL24O00175 119 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
PTPN3-204ENST00000446349 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 I3L3M4 83 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 AZU1P20160 251 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 PRB3Q04118 309 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-204ENST00000446349 KLF17Q5JT82 389 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-204ENST00000446349 RUSC1-AS1Q66K80 236 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 GFI1Q99684 422 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 PYGO2Q9BRQ0 406 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 CSTL1Q9H114 145 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 IGHV7-4-1A0A0J9YVY3 117 aa6.87□□□□□ -1.31
PTPN3-204ENST00000446349 HOXD3P31249 432 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-204ENST00000446349 ZNF48Q96MX3 618 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-204ENST00000446349 BTCP35070 178 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 NDPQ00604 133 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 IGKV1D-8A0A087WSZ0 117 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 LYZL1Q6UWQ5 148 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 TECTAO75443 2155 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 DYSFO75923 2080 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 DEFB130BP0DP73 79 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 DEFB130AP0DP74 79 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 VWC2Q2TAL6 325 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 SPAG8Q99932 426 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-204ENST00000446349 RBAKDNA6NC62 111 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 EVI2AP22794 236 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 TMEM249Q2WGJ8 235 aa6.86□□□□□ -1.31
PTPN3-204ENST00000446349 NTF4P34130 210 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 RHOHQ15669 191 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 TRAV2A0A0B4J234 112 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 SHISA9B4DS77 424 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-204ENST00000446349 C17orf58Q2M2W7 97 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 NKAPP1Q8N9T2 125 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 KLK5Q9Y337 293 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-204ENST00000446349 MED13Q9UHV7 2174 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 ADMP35318 185 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 TFF1P04155 84 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 Q86TA4 180 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 IGKV3D-20A0A0C4DH25 116 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 PRSS46E5RG02 174 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 A0A1B0GWB2 263 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 H3BMM0 161 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 IGKV1-16P04430 117 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 Q5BKY6 102 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 C1orf159Q96HA4 380 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 LSM4Q9Y4Z0 139 aaKnown RBP6.85□□□□□ -1.31
PTPN3-204ENST00000446349 D6R8Y8 96 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 ZNF134P52741 427 aa6.85□□□□□ -1.31
PTPN3-204ENST00000446349 ZNF106Q9H2Y7 1883 aaKnown RBP6.85□□□□□ -1.31
PTPN3-204ENST00000446349 MUC21A0A0G2JKD1 596 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 MUC21A0A140T8X8 626 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 THAP8Q8NA92 274 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 SERF1AO75920 110 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
PTPN3-204ENST00000446349 C8orf86Q6ZUL3 223 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
PTPN3-204ENST00000446349 ANAPC10Q9UM13 185 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 TRAV5A0A0B4J249 113 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 ZNF114Q8NC26 417 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 IGFBPL1Q8WX77 278 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 TRAV3A0A0B4J244 114 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 CREBBPQ92793 2442 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 LINC01551Q86U37 167 aa6.84□□□□□ -1.31
PTPN3-204ENST00000446349 GPR179Q6PRD1 2367 aa6.84□□□□□ -1.32
PTPN3-204ENST00000446349 LY6HO94772 140 aa6.84□□□□□ -1.32
PTPN3-204ENST00000446349 PRSS57Q6UWY2 283 aa6.84□□□□□ -1.32
PTPN3-204ENST00000446349 H0YIZ8 118 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 H3BQ85 93 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 H3BRN7 92 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 PRIMA1Q86XR5 153 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 RPP25LQ8N5L8 163 aaKnown RBP6.83□□□□□ -1.32
PTPN3-204ENST00000446349 SSBP4Q9BWG4 385 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms