RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SPG11Q96JI7 2443 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 A0A1W2PNM2 257 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 SLC22A1O15245 554 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 CST8O60676 142 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 BAMBIQ13145 260 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 IGFL1Q6UW32 110 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 Q6ZS52 159 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 MIR17HGQ75NE6 70 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR51T1Q8NGJ9 327 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 CMTM2Q8TAZ6 248 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 MBD3L1Q8WWY6 194 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 SLAMF6Q96DU3 332 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 SCGB3A1Q96QR1 104 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 CCDC32Q9BV29 185 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR2J1Q9GZK6 312 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 TMEM133Q9H2Q1 129 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 CELSR2Q9HCU4 2923 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 NBPF19A0A087WUL8 3843 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 ABCA2Q9BZC7 2435 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 TRAV7A0A075B6U4 112 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 G3V3Q6 166 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 C19orf84I3L1E1 186 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 TAX1BP3O14907 124 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 OGNP20774 298 aaKnown RBP2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 EIF2B2P49770 351 aaKnown RBP2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 EMP1P54849 157 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 KRTAP21-3Q3LHN1 58 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 LYZL1Q6UWQ5 148 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 SLC35E3Q7Z769 313 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 HIST3H2BBQ8N257 126 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 RPP25LQ8N5L8 163 aaKnown RBP2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 ST6GALNAC3Q8NDV1 305 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 Q8NDZ9 215 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR8D4Q8NGM9 314 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 OSTCQ9NRP0 149 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 CKLFQ9UBR5 152 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 Q9Y3F1 56 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 PCNX1Q96RV3 2341 aa2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 URB1O60287 2271 aaKnown RBP2.37□□□□□ -2.03
HMGB1P48-201ENST00000446155 TET1Q8NFU7 2136 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 MYH11P35749 1972 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 PHIPQ8WWQ0 1821 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 CELSR1Q9NYQ6 3014 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 A0A087X0T9 212 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 A0A0D9SEW6 157 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 H7C2G1 150 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 IGKV1-16P04430 117 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 NFYAP23511 347 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 NFYBP25208 207 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 SRP14P37108 136 aaKnown RBP2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 EIF5AP63241 154 aaKnown RBP2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 SUPT4H1P63272 117 aaKnown RBP2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 TCF24Q7RTU0 167 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 C10orf126Q8N4M7 172 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR4C16Q8NGL9 310 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR5J2Q8NH18 312 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 STAG3L4Q8TBR4 150 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 WFDC5Q8TCV5 224 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 DCANP1Q8TF63 244 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 C11orf40Q8WZ69 217 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 ADAT3Q96EY9 351 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 PKMYT1Q99640 499 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 GINS4Q9BRT9 223 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 SPANXA1Q9NS26 97 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 LAMTOR3Q9UHA4 124 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR52A1Q9UKL2 312 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 PTPRFP10586 1907 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 PTPRSQ13332 1948 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 LOC285556D6RIA3 1793 aa2.36□□□□□ -2.03
HMGB1P48-201ENST00000446155 ADGRG4Q8IZF6 3080 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 IGKV1-9A0A0C4DH69 117 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 ODF3BA8MYP8 253 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 M0R378 163 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 PPBPP02775 128 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 DEFA4P12838 97 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 PABPC1L2AQ5JQF8 200 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 BCL2L15Q5TBC7 163 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 AGTRAPQ6RW13 159 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 TMEM86AQ8N2M4 240 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 OR9Q1Q8NGQ5 310 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 PFN4Q8NHR9 129 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 THEM6Q8WUY1 208 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 MAFIPQ8WZ33 124 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 TMEM106AQ96A25 262 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 GPX7Q96SL4 187 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 PSORS1C2Q9UIG4 136 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 ASB4Q9Y574 426 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 HIVEP1P15822 2718 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 CRYBG3Q68DQ2 2970 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 AHCTF1Q8WYP5 2266 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 CACNA1EQ15878 2313 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 BOD1L1Q8NFC6 3051 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 ATRQ13535 2644 aa2.35□□□□□ -2.03
HMGB1P48-201ENST00000446155 SDK1Q7Z5N4 2213 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 DOPEY2Q9Y3R5 2298 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 IGLV10-54A0A075B6I4 117 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 TMEM212A6NML5 194 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms