RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TRGV4A0A0C4DH28 118 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 IGHV1-3A0A0C4DH29 117 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 SOCS3O14543 225 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 VWC2Q2TAL6 325 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 C2orf66Q6UXQ4 117 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 FOXL2NBQ6ZUU3 175 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 PRIMA1Q86XR5 153 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 C7orf69Q9H7B7 122 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 MDS2Q8NDY4 140 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 C1orf147Q96MC9 270 aaPredicted RBP15.07■□□□□ 0
SHANK3-203ENST00000445220 THBDP07204 575 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 IGHV1-8P0DP01 117 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 FGF6P10767 208 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 STHQ8IWL8 128 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 B5MCH6 92 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 ARTNQ5T4W7 220 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 TMEM200BQ69YZ2 307 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 Q6ZVH6 145 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 PRO1854Q9UHT4 67 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 WFDC12Q8WWY7 111 aa15.07■□□□□ 0
SHANK3-203ENST00000445220 FCN3O75636 299 aa15.06■□□□□ 0
SHANK3-203ENST00000445220 COLCA1Q6ZS62 124 aa15.06■□□□□ 0
SHANK3-203ENST00000445220 Q0VFX4 171 aa15.06■□□□□ 0
SHANK3-203ENST00000445220 TMEM141Q96I45 108 aa15.06■□□□□ 0
SHANK3-203ENST00000445220 IL15RAQ13261 267 aa15.06■□□□□ 0
SHANK3-203ENST00000445220 CITED2Q99967 270 aaPredicted RBP15.06■□□□□ 0
SHANK3-203ENST00000445220 ZCCHC24Q8N2G6 241 aaKnown RBP15.06■□□□□ 0
SHANK3-203ENST00000445220 K7ERJ3 54 aa15.05■□□□□ 0
SHANK3-203ENST00000445220 AMTNQ6UX39 209 aa15.05■□□□□ 0
SHANK3-203ENST00000445220 RPL36AP83881 106 aaKnown RBP15.05■□□□□ 0
SHANK3-203ENST00000445220 MRPL51Q4U2R6 128 aaKnown RBP15.05■□□□□ 0
SHANK3-203ENST00000445220 RNASE8Q8TDE3 154 aaKnown RBP15.05■□□□□ 0
SHANK3-203ENST00000445220 RPL36ALQ969Q0 106 aaKnown RBP15.05■□□□□ 0
SHANK3-203ENST00000445220 SS18L2Q9UHA2 77 aa15.05■□□□□ 0
SHANK3-203ENST00000445220 THADAQ6YHU6 1953 aa15.05■□□□□ -0
SHANK3-203ENST00000445220 SIGLEC9Q9Y336 463 aa15.05■□□□□ -0
SHANK3-203ENST00000445220 PIEZO1Q92508 2521 aa15.05■□□□□ -0
SHANK3-203ENST00000445220 SRD5A1P18405 259 aa15.04■□□□□ -0
SHANK3-203ENST00000445220 PYGO2Q9BRQ0 406 aa15.04■□□□□ -0
SHANK3-203ENST00000445220 SIGLEC8Q9NYZ4 499 aa15.04■□□□□ -0
SHANK3-203ENST00000445220 TP53TG1Q9Y2A0 90 aa15.04■□□□□ -0
SHANK3-203ENST00000445220 B3GALT5-AS1P59052 145 aa15.04■□□□□ -0
SHANK3-203ENST00000445220 COL6A6A6NMZ7 2263 aa15.04■□□□□ -0
SHANK3-203ENST00000445220 C12orf74Q32Q52 190 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 IGFL4Q6B9Z1 124 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 PRADC1Q9BSG0 188 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 TRAV41A0A0B4J266 112 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 MRPL35Q9NZE8 188 aaKnown RBP15.03■□□□□ -0
SHANK3-203ENST00000445220 PF4P02776 101 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 MORN5Q5VZ52 161 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 TMEM14BQ9NUH8 114 aa15.03■□□□□ -0
SHANK3-203ENST00000445220 IGHV3-73A0A0B4J1V6 119 aa15.02■□□□□ -0
SHANK3-203ENST00000445220 IGHG3P01860 377 aa15.02□□□□□ -0.01
SHANK3-203ENST00000445220 WNT2P09544 360 aa15.02□□□□□ -0.01
SHANK3-203ENST00000445220 FNDC1Q4ZHG4 1894 aaPredicted RBP15.02□□□□□ -0.01
SHANK3-203ENST00000445220 DOCK11Q5JSL3 2073 aa15.02□□□□□ -0.01
SHANK3-203ENST00000445220 HLA-DMBP28068 263 aa15.02□□□□□ -0.01
SHANK3-203ENST00000445220 C15orf53Q8NAA6 179 aa15.02□□□□□ -0.01
SHANK3-203ENST00000445220 C1orf159Q96HA4 380 aa15.02□□□□□ -0.01
SHANK3-203ENST00000445220 SRSF8Q9BRL6 282 aaKnown RBP15.01□□□□□ -0.01
SHANK3-203ENST00000445220 MBD3L4A6NDZ8 208 aaPredicted RBP15.01□□□□□ -0.01
SHANK3-203ENST00000445220 MBD3L3A6NE82 208 aaPredicted RBP15.01□□□□□ -0.01
SHANK3-203ENST00000445220 MBD3L5A6NJ08 208 aaPredicted RBP15.01□□□□□ -0.01
SHANK3-203ENST00000445220 F8VRH5 84 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 IGKV1-39P01597 117 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 IGKV1D-39P04432 117 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 HLA-DRB4P13762 266 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 ERCC8Q13216 396 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 C5orf64Q2M2E5 130 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 MBD3L2Q8NHZ7 208 aaPredicted RBP15.01□□□□□ -0.01
SHANK3-203ENST00000445220 HLA-DRB4X5D2U9 266 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 OOSP1A8MZH6 123 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 IGKV1-16P04430 117 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 KLF5Q13887 457 aaPredicted RBP15.01□□□□□ -0.01
SHANK3-203ENST00000445220 TEX48A0A1B0GUV7 120 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 C6orf226Q5I0X4 101 aa15.01□□□□□ -0.01
SHANK3-203ENST00000445220 IGKV1D-17A0A075B6S4 117 aa15□□□□□ -0.01
SHANK3-203ENST00000445220 A0A087WWL8 130 aa15□□□□□ -0.01
SHANK3-203ENST00000445220 ZNF415Q09FC8 603 aa15□□□□□ -0.01
SHANK3-203ENST00000445220 TRBV7-1A0A0A6YYK4 115 aa15□□□□□ -0.01
SHANK3-203ENST00000445220 TRPT1Q86TN4 253 aaKnown RBP15□□□□□ -0.01
SHANK3-203ENST00000445220 BOD1L2Q8IYS8 172 aa15□□□□□ -0.01
SHANK3-203ENST00000445220 ANKRD29Q8N6D5 301 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 WIPF2Q8TF74 440 aaPredicted RBP14.99□□□□□ -0.01
SHANK3-203ENST00000445220 ETV2O00321 342 aaPredicted RBP14.99□□□□□ -0.01
SHANK3-203ENST00000445220 HS3ST6Q96QI5 342 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 ZNF672Q499Z4 452 aaPredicted RBP14.99□□□□□ -0.01
SHANK3-203ENST00000445220 C8orf49Q96NF6 230 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 GAFA1Q96PS6 74 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 ZNF747Q9BV97 191 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 UBL5Q9BZL1 73 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 TRBV19A0A075B6N1 114 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 A0A1W2PPI3 338 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 CARD19Q96LW7 228 aa14.99□□□□□ -0.01
SHANK3-203ENST00000445220 TRAV13-1A0A0B4J241 112 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 LYNX1G3V0Z9 82 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 LYNX1P0DP58 116 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 NTN5Q8WTR8 489 aaPredicted RBP14.98□□□□□ -0.01
SHANK3-203ENST00000445220 HTN3P15516 51 aa14.98□□□□□ -0.01
SHANK3-203ENST00000445220 INTS1Q8N201 2190 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms