RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PPP1R14DQ9NXH3 145 aa7.74□□□□□ -1.17
SF3A1-203ENST00000444440 MBD2Q9UBB5 411 aa7.74□□□□□ -1.17
SF3A1-203ENST00000444440 RFNGQ9Y644 331 aa7.74□□□□□ -1.17
SF3A1-203ENST00000444440 HERC2O95714 4834 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 TRAV5A0A0B4J249 113 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 LOC102723971A0A1B0GUV8 181 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 PLAC8L1A1L4L8 177 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 ZNF705GA8MUZ8 300 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-203ENST00000444440 PRAC2D3DTV9 90 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 AMBPP02760 352 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 TCTAP57738 103 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 KIR3DS1Q14943 382 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 FCN2Q15485 313 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 OR8A1Q8NGG7 326 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 IGF2BP2-AS1Q96M15 143 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 PARD6GQ9BYG4 376 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-203ENST00000444440 GOLT1BQ9Y3E0 138 aa7.73□□□□□ -1.17
SF3A1-203ENST00000444440 YTHDF2Q9Y5A9 579 aaKnown RBP7.73□□□□□ -1.17
SF3A1-203ENST00000444440 H3BQ15 152 aa7.72□□□□□ -1.17
SF3A1-203ENST00000444440 IGLC2P0DOY2 106 aa7.72□□□□□ -1.17
SF3A1-203ENST00000444440 AZU1P20160 251 aa7.72□□□□□ -1.17
SF3A1-203ENST00000444440 HIST1H1AQ02539 215 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-203ENST00000444440 SAT2Q96F10 170 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-203ENST00000444440 ZNF331Q9NQX6 463 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-203ENST00000444440 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
SF3A1-203ENST00000444440 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
SF3A1-203ENST00000444440 BOLA2-SMG1P6H3BVE0 249 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 HBE1P02100 147 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 GIPP09681 153 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-203ENST00000444440 SPART-AS1P0CW21 52 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 HIST1H1EP10412 219 aaKnown RBP7.71□□□□□ -1.18
SF3A1-203ENST00000444440 RHOBP62745 196 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 RRN3P1Q2M238 152 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 GCSAMLQ5JQS6 135 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 INO80EQ8NBZ0 244 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-203ENST00000444440 OR10J6PQ8NGY7 276 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 RPUSD4Q96CM3 377 aaKnown RBP7.71□□□□□ -1.18
SF3A1-203ENST00000444440 NIPSNAP3BQ9BS92 247 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 MRPL32Q9BYC8 188 aaKnown RBP7.71□□□□□ -1.18
SF3A1-203ENST00000444440 SMIM3Q9BZL3 60 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 TIMM9Q9Y5J7 89 aa7.71□□□□□ -1.18
SF3A1-203ENST00000444440 TMEM189A5PLL7 270 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 ZNF253O75346 499 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 INSP01308 110 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 ZNF266Q14584 549 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 OXA1LQ15070 435 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 FFAR4Q5NUL3 377 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 TMEM208Q9BTX3 173 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 AAMDCQ9H7C9 122 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 ZNF586Q9NXT0 402 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 PRELID1Q9Y255 219 aa7.7□□□□□ -1.18
SF3A1-203ENST00000444440 HTN3P15516 51 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 TAS2R45P59539 299 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 PDE6HQ13956 83 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 AQP10Q96PS8 301 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 OR51M1Q9H341 326 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 FUT9Q9Y231 359 aa7.69□□□□□ -1.18
SF3A1-203ENST00000444440 TRBV19A0A075B6N1 114 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 A0A1W2PPV4 95 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 NBEAP1P0C6P0 100 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 PYYP10082 97 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 TSPOP30536 169 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-203ENST00000444440 MIR17HGQ75NE6 70 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 OR2T35Q8NGX2 323 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 BLNKQ8WV28 456 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 MRPL53Q96EL3 112 aaKnown RBP7.68□□□□□ -1.18
SF3A1-203ENST00000444440 PAXXQ9BUH6 204 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 SLC25A2Q9BXI2 301 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 WFDC1Q9HC57 220 aa7.68□□□□□ -1.18
SF3A1-203ENST00000444440 BORCS7-ASMTA0A0B4J1R7 106 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 TEX48A0A1B0GUV7 120 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 M0R3E3 92 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 OR7C2O60412 319 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 NDUFB4O95168 129 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 M6PRP20645 277 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 DAD1P61803 113 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 KHDC3LQ587J8 217 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 GFI1BQ5VTD9 330 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 TMEM88Q6PEY1 159 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 RNF141Q8WVD5 230 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 FAM167A-AS1Q96KT0 104 aa7.67□□□□□ -1.18
SF3A1-203ENST00000444440 FXYD6-FXYD2A0A087WZ82 144 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 J3KRW8 73 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 CT45A10P0DMU9 189 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 CDKN1BP46527 198 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 ERCC8Q13216 396 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 POM121L12Q8N7R1 296 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 RNASE8Q8TDE3 154 aaKnown RBP7.66□□□□□ -1.18
SF3A1-203ENST00000444440 LINC01587Q99440 93 aa7.66□□□□□ -1.18
SF3A1-203ENST00000444440 LYRM9A8MSI8 78 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 NPIPB6E9PJ23 425 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 M0R2N4 97 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 MBP02144 154 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 P0DMU3 169 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 FAM231AP0DMU4 169 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 FAM231CP0DMU5 169 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms