RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
PDLIM2-212ENST00000443561 RNF141Q8WVD5 230 aa9.28□□□□□ -0.92
PDLIM2-212ENST00000443561 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
PDLIM2-212ENST00000443561 RNF24Q9Y225 148 aa9.28□□□□□ -0.92
PDLIM2-212ENST00000443561 IGHV4-28A0A0C4DH34 117 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 RHOBP62745 196 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 PSG9Q00887 426 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 PDE6HQ13956 83 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 GUK1Q16774 197 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 SPINK13Q1W4C9 94 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 ACOT6Q3I5F7 207 aaPredicted RBP9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 EBLN2Q6P2I7 272 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 OR10G4Q8NGN3 311 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 RARRES2Q99969 163 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 LYSTQ99698 3801 aa9.27□□□□□ -0.93
PDLIM2-212ENST00000443561 NPIPB6E9PJ23 425 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 OR7C2O60412 319 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 PRM2P04554 102 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 STAG3L2P0CL84 134 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 STAG3L3P0CL85 134 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 UBE2L3P68036 154 aaKnown RBP9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 ERCC8Q13216 396 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 SUN5Q8TC36 379 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 LRRC20Q8TCA0 184 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 RAB24Q969Q5 203 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 FAM19A4Q96LR4 140 aa9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 C11orf68Q9H3H3 251 aaKnown RBP9.26□□□□□ -0.93
PDLIM2-212ENST00000443561 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 BOLA2-SMG1P6H3BVE0 249 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 CT45A10P0DMU9 189 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 SERF2P84101 59 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 ICAM4Q14773 271 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 LGALSLQ3ZCW2 172 aaPredicted RBP9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 KHDC3LQ587J8 217 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 TMEM41BQ5BJD5 291 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
PDLIM2-212ENST00000443561 BORCS7-ASMTA0A0B4J1R7 106 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 TAAR5O14804 337 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 BCL2L11O43521 198 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 DUSP14O95147 198 aaKnown RBP9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 PRR9Q5T870 116 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 VGLL1Q99990 258 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 ARPC5LQ9BPX5 153 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 Q9H3A6 140 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 TENM2Q9NT68 2774 aa9.24□□□□□ -0.93
PDLIM2-212ENST00000443561 JTBO76095 146 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 C1QBP02746 253 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 FHITP49789 147 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 PQLC2Q6ZP29 291 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 TMUB2Q71RG4 321 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 GNPNAT1Q96EK6 184 aaPredicted RBP9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 NEU1Q99519 415 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 DNAH1Q9P2D7 4330 aa9.23□□□□□ -0.93
PDLIM2-212ENST00000443561 PLAC8L1A1L4L8 177 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 GCHFRP30047 84 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 TAS2R45P59539 299 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 NUTF2P61970 127 aaKnown RBP9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 RANP62826 216 aaKnown RBP9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 Q6ZQT7 251 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 C1QTNF4Q9BXJ3 329 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 TMPRSS5Q9H3S3 457 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 PRELID1Q9Y255 219 aa9.22□□□□□ -0.93
PDLIM2-212ENST00000443561 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.93
PDLIM2-212ENST00000443561 A0A0D9SG52 128 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 A0A1W2PPV4 95 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 GGTLC3B5MD39 225 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 C3orf84H3BNL1 204 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 MIFP14174 115 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 NANOS2P60321 138 aaKnown RBP9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 GNG5P63218 68 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 C9orf62Q8N4C0 152 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 ZFAND2AQ8N6M9 145 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 Q8TAT8 98 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 ODF3Q96PU9 254 aa9.21□□□□□ -0.94
PDLIM2-212ENST00000443561 IGHV3OR16-12A0A075B7B8 117 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 KLLNB2CW77 178 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 AZU1P20160 251 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 FGF8P55075 233 aaPredicted RBP9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 AKAP14Q86UN6 197 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 LYPD1Q8N2G4 141 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 OR10J6PQ8NGY7 276 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms