RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 UBE2G1P62253 170 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 TIMM8BQ9Y5J9 83 aaPredicted RBP10.33□□□□□ -0.76
ACTN4-204ENST00000440400 OR4C46A6NHA9 309 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
ACTN4-204ENST00000440400 IGKV1-17P01599 117 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 MSMBP08118 114 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 RPL24P83731 157 aaKnown RBP10.33□□□□□ -0.76
ACTN4-204ENST00000440400 OR10J3Q5JRS4 329 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 C5orf56Q8N8D9 126 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
ACTN4-204ENST00000440400 PERPQ96FX8 193 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 PMCHL2Q9BQD1 86 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 GNB1LQ9BYB4 327 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
ACTN4-204ENST00000440400 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 DOPEY1Q5JWR5 2465 aa10.33□□□□□ -0.76
ACTN4-204ENST00000440400 CELSR1Q9NYQ6 3014 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 COX7A2P2O60397 106 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 ARHGAP32A7KAX9 2087 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 CNIH1O95406 144 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 GP9P14770 177 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 CD24P25063 80 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 SLC25A34Q6PIV7 304 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 BEX4Q9NWD9 120 aaPredicted RBP10.32□□□□□ -0.76
ACTN4-204ENST00000440400 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 GGTLC3B5MD39 225 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 LINC00173Q6ZV60 143 aa10.32□□□□□ -0.76
ACTN4-204ENST00000440400 FBLL1A6NHQ2 334 aaKnown RBP10.31□□□□□ -0.76
ACTN4-204ENST00000440400 RAB9AP51151 201 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 C18orf32Q8TCD1 76 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 ATP6V0BQ99437 205 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 ZNF580Q9UK33 172 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 A0A1B0GV72 72 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 H3BUT2 72 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 TCTAP57738 103 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 HES1Q14469 280 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
ACTN4-204ENST00000440400 USP9YO00507 2555 aaPredicted RBP10.31□□□□□ -0.76
ACTN4-204ENST00000440400 APCSP02743 223 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 C12orf54Q6X4T0 127 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 RAB37Q96AX2 223 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 JMJD8Q96S16 334 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 V9GYV3 84 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 TRAV5A0A0B4J249 113 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 B4DSR2 109 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 CD5LO43866 347 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 CRYBA4P53673 196 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 J3QLI3 93 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 FSHBP01225 129 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 OR10J4P0C629 311 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 LOXL1Q08397 574 aaPredicted RBP10.3□□□□□ -0.76
ACTN4-204ENST00000440400 ZNF329Q86UD4 541 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 CITED1Q99966 193 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
ACTN4-204ENST00000440400 VPS13CQ709C8 3753 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 C2orf70A6NJV1 201 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 H3BRN7 92 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 AMY1AP04745 511 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 SPXQ9BT56 116 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-204ENST00000440400 MOB4Q9Y3A3 225 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
ACTN4-204ENST00000440400 IGHV3-48P01763 117 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 TIGITQ495A1 244 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 NAV3Q8IVL0 2385 aa10.29□□□□□ -0.76
ACTN4-204ENST00000440400 A6NDX4 124 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 APELAP0DMC3 54 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 KLF17Q5JT82 389 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-204ENST00000440400 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 NCBP2LA6PVI3 153 aaKnown RBP10.28□□□□□ -0.76
ACTN4-204ENST00000440400 SHANK2-AS3Q9BTD1 123 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 MFAP4P55083 255 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 ZNF491Q8N8L2 437 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 NHLRC2Q8NBF2 726 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 HIGD1AQ9Y241 93 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 KLF12Q9Y4X4 402 aa10.28□□□□□ -0.76
ACTN4-204ENST00000440400 IGLV2-8P01709 118 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 UBE2L3P68036 154 aaKnown RBP10.27□□□□□ -0.77
ACTN4-204ENST00000440400 GTF2H5Q6ZYL4 71 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 MT-ND6P03923 174 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 IGHV4-38-2P0DP08 117 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 UFSP1Q6NVU6 142 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 SIGMAR1Q99720 223 aa10.27□□□□□ -0.77
ACTN4-204ENST00000440400 SLC25A39Q9BZJ4 359 aaPredicted RBP10.27□□□□□ -0.77
ACTN4-204ENST00000440400 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
ACTN4-204ENST00000440400 IGF1P05019 195 aa10.26□□□□□ -0.77
ACTN4-204ENST00000440400 CKS1BP61024 79 aa10.26□□□□□ -0.77
ACTN4-204ENST00000440400 C9orf139Q6ZV77 190 aa10.26□□□□□ -0.77
ACTN4-204ENST00000440400 ZNF502Q8TBZ5 544 aa10.26□□□□□ -0.77
ACTN4-204ENST00000440400 TRAV9-1A0A075B6T8 112 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms