RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 ID3Q02535 119 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 LINC00305Q7Z4B0 112 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 C11orf72Q8NBR9 251 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 NPVFQ9HCQ7 196 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 PSENENQ9NZ42 101 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 FUT9Q9Y231 359 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 TRGV1A0A0A0MS02 117 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 J3QL48 77 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 PAX4O43316 350 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 CCNKO75909 580 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 POLR2GP62487 172 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRIM39-210ENST00000440271 PXDC1Q5TGL8 231 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 BPIFA4PQ86YQ2 179 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 ODF3Q96PU9 254 aa13.99□□□□□ -0.17
TRIM39-210ENST00000440271 TRAV9-2A0A087WT02 112 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 HAMPP81172 84 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 SLC38A11Q08AI6 406 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 PPP1R1AQ13522 171 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 C4orf46Q504U0 113 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 TEPPQ6URK8 271 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 LYPD5Q6UWN5 251 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 Q6ZSN1 163 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 ZNF680Q8NEM1 530 aa13.98□□□□□ -0.17
TRIM39-210ENST00000440271 NPIPB6E9PJ23 425 aa13.97□□□□□ -0.17
TRIM39-210ENST00000440271 FAUP35544 74 aaKnown RBP13.97□□□□□ -0.17
TRIM39-210ENST00000440271 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-210ENST00000440271 SOSTQ9BQB4 213 aa13.97□□□□□ -0.17
TRIM39-210ENST00000440271 PXMP4Q9Y6I8 212 aa13.97□□□□□ -0.17
TRIM39-210ENST00000440271 FNDC10F2Z333 226 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 GOSR2O14653 212 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 MORN5Q5VZ52 161 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 SMIM8Q96KF7 97 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 MSRB1Q9NZV6 116 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 CCDC59Q9P031 241 aaKnown RBP13.96□□□□□ -0.17
TRIM39-210ENST00000440271 KLF12Q9Y4X4 402 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 LY96Q9Y6Y9 160 aa13.96□□□□□ -0.17
TRIM39-210ENST00000440271 FABP12A6NFH5 140 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 H3BQ15 152 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 SPINK4O60575 86 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
TRIM39-210ENST00000440271 SMIM18P0DKX4 95 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 TMEM37Q8WXS4 190 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 ST6GAL2Q96JF0 529 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 LINC00467Q9BRT7 94 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 MGAT4CQ9UBM8 478 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 PRO0255Q9UI72 69 aa13.95□□□□□ -0.18
TRIM39-210ENST00000440271 C7orf71A4D174 169 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 SSSCA1O60232 199 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 IGHV3-53P01767 116 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 METTL15P1P0C7V9 234 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 OPCMLQ14982 345 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 ANXA2RQ3ZCQ2 193 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 TMEM14EPQ6UXP3 125 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 ZNF546Q86UE3 836 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 OR10P1Q8NGE3 313 aa13.94□□□□□ -0.18
TRIM39-210ENST00000440271 SLC25A21Q9BQT8 299 aaPredicted RBP13.94□□□□□ -0.18
TRIM39-210ENST00000440271 AGPAT2O15120 278 aa13.93□□□□□ -0.18
TRIM39-210ENST00000440271 COX7A2P2O60397 106 aa13.93□□□□□ -0.18
TRIM39-210ENST00000440271 TNFSF8P32971 234 aa13.93□□□□□ -0.18
TRIM39-210ENST00000440271 CRYBA4P53673 196 aa13.93□□□□□ -0.18
TRIM39-210ENST00000440271 MRPL23Q16540 153 aaKnown RBP13.93□□□□□ -0.18
TRIM39-210ENST00000440271 EIF4E3Q8N5X7 224 aaKnown RBP13.93□□□□□ -0.18
TRIM39-210ENST00000440271 DYNC2LI1Q8TCX1 351 aa13.93□□□□□ -0.18
TRIM39-210ENST00000440271 HHLA3Q9XRX5 114 aa13.93□□□□□ -0.18
TRIM39-210ENST00000440271 K7EP13 123 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 PRAF2O60831 178 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 TCL1AP56279 114 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 SLAQ13239 276 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 TOMM5Q8N4H5 51 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 MCFD2Q8NI22 146 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 TMEM70Q9BUB7 260 aa13.92□□□□□ -0.18
TRIM39-210ENST00000440271 KLLNB2CW77 178 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 AP3S2P59780 193 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 CD300CQ08708 224 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 FHL2Q14192 279 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 GUK1Q16774 197 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 C10orf113Q5VZT2 155 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 TRIM63Q969Q1 353 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 C8orf49Q96NF6 230 aa13.91□□□□□ -0.18
TRIM39-210ENST00000440271 IGLV5-52A0A0A0MRZ9 124 aa13.9□□□□□ -0.18
TRIM39-210ENST00000440271 EVI2AP22794 236 aa13.9□□□□□ -0.18
TRIM39-210ENST00000440271 ERCC8Q13216 396 aa13.9□□□□□ -0.18
TRIM39-210ENST00000440271 BTN1A1Q13410 526 aa13.9□□□□□ -0.18
TRIM39-210ENST00000440271 WFDC10BQ8IUB3 73 aa13.9□□□□□ -0.18
TRIM39-210ENST00000440271 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.18
TRIM39-210ENST00000440271 TRAV5A0A0B4J249 113 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 MPDU1O75352 247 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 RNASE4P34096 147 aaKnown RBP13.89□□□□□ -0.19
TRIM39-210ENST00000440271 ARL16Q0P5N6 197 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 IBA57Q5T440 356 aaKnown RBP13.89□□□□□ -0.19
TRIM39-210ENST00000440271 FAM19A4Q96LR4 140 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 MGST2Q99735 147 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 VGLL1Q99990 258 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 DNAJC4Q9NNZ3 241 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 TP53TG3Q9ULZ0 132 aa13.89□□□□□ -0.19
TRIM39-210ENST00000440271 C9orf170A2RU37 121 aa13.88□□□□□ -0.19
TRIM39-210ENST00000440271 OR4E1P0C645 316 aa13.88□□□□□ -0.19
TRIM39-210ENST00000440271 MRPL32Q9BYC8 188 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms