RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 IGKV2D-40P01614 121 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-202ENST00000439724 AMBPP02760 352 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 FABP4P15090 132 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 SAPCD1Q5SSQ6 148 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 OR4X2Q8NGF9 303 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 CSPG4Q6UVK1 2322 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 IGHV3-66A0A0C4DH42 116 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 IGHV3-11P01762 117 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 CRISP2P16562 243 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 PSMB8P28062 276 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 HLA-DMBP28068 263 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 Q0VG73 95 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 TMEM95Q3KNT9 176 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 LCN12Q6JVE5 192 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 UNQ9165/PRO28630Q6UXU0 137 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
SMAD3-202ENST00000439724 TCF24Q7RTU0 167 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 OR2D3Q8NGH3 330 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-202ENST00000439724 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
SMAD3-202ENST00000439724 IGHV3OR16-13A0A075B7E8 117 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 IGHV3-49A0A0A0MS15 119 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 IGHV3-74A0A0B4J1X5 117 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 CRIP1P50238 77 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-202ENST00000439724 RAB4BP61018 213 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 IGFL4Q6B9Z1 124 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 PRR25Q96S07 402 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 CLEC5AQ9NY25 188 aa9.02□□□□□ -0.97
SMAD3-202ENST00000439724 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-202ENST00000439724 ASH1LQ9NR48 2969 aaKnown RBP9.02□□□□□ -0.97
SMAD3-202ENST00000439724 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 GRIFINA4D1Z8 144 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 APCSP02743 223 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 ESDP10768 282 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 HBBP68871 147 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 PYY3Q5JQD4 70 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 GDF5OSQ5U4N7 250 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 LCNL1Q6ZST4 164 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 TEX29Q8N6K0 151 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 ASCL2Q99929 193 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 NPFFR1Q9GZQ6 430 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 PEF1Q9UBV8 284 aaKnown RBP9.01□□□□□ -0.97
SMAD3-202ENST00000439724 TP53TG3Q9ULZ0 132 aa9.01□□□□□ -0.97
SMAD3-202ENST00000439724 A0A1B0GUS0 222 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 A0A1W2PS18 150 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 ZNF705FA8MVS1 300 aaPredicted RBP9□□□□□ -0.97
SMAD3-202ENST00000439724 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
SMAD3-202ENST00000439724 PRB4P10163 310 aaPredicted RBP9□□□□□ -0.97
SMAD3-202ENST00000439724 OR10J3Q5JRS4 329 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 DNLZQ5SXM8 178 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 TMEM256Q8N2U0 113 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 VGLL1Q99990 258 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 ZNF702PQ9H963 129 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 NIT2Q9NQR4 276 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
SMAD3-202ENST00000439724 SMAD7O15105 426 aaKnown RBP9□□□□□ -0.97
SMAD3-202ENST00000439724 SH2D1AO60880 128 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 LINC00310P59036 64 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 SLAQ13239 276 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 FAM162BQ5T6X4 162 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 Q6AWC8 147 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 HIST2H2BCQ6DN03 193 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 RNF182Q8N6D2 247 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 WFDC11Q8NEX6 87 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 Q8TAT8 98 aa9□□□□□ -0.97
SMAD3-202ENST00000439724 KMT2BQ9UMN6 2715 aaPredicted RBP8.99□□□□□ -0.97
SMAD3-202ENST00000439724 NAV2Q8IVL1 2488 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 DOPEY2Q9Y3R5 2298 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 POLQO75417 2590 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 IGHV7-4-1A0A0J9YVY3 117 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 A8MWP6 167 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 PRAC2D3DTV9 90 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 K7EMT4 169 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 ELANEP08246 267 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 GZMBP10144 247 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 SRIP30626 198 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 BMI1P35226 326 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 FOXE3Q13461 319 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 KIAA1644Q3SXP7 199 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 GPHB5Q86YW7 130 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 MYOZ3Q8TDC0 251 aa8.99□□□□□ -0.97
SMAD3-202ENST00000439724 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
SMAD3-202ENST00000439724 TMEM189A5PLL7 270 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 HAX1O00165 279 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 SOCS3O14543 225 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 NUPR1O60356 82 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 SERF1AO75920 110 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 CAMPP49913 170 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 S100A12P80511 92 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 SRSF2Q01130 221 aaKnown RBP8.98□□□□□ -0.97
SMAD3-202ENST00000439724 BAGE3Q86Y29 109 aa8.98□□□□□ -0.97
SMAD3-202ENST00000439724 Q8N2B8 174 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms