RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CBY3A6NI87 242 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 M0R2N4 97 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 SLC17A3O00476 420 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 ZNF253O75346 499 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 PRM2P04554 102 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 AZU1P20160 251 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 LEPP41159 167 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 IL15RAQ13261 267 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 SOHLH1Q5JUK2 328 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 MORN5Q5VZ52 161 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 SLC25A31Q9H0C2 315 aa13.31□□□□□ -0.28
CCDC78-204ENST00000439619 F5H768 121 aa13.3□□□□□ -0.28
CCDC78-204ENST00000439619 H3BQ15 152 aa13.3□□□□□ -0.28
CCDC78-204ENST00000439619 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-204ENST00000439619 CYCSP99999 105 aaKnown RBP13.3□□□□□ -0.28
CCDC78-204ENST00000439619 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
CCDC78-204ENST00000439619 SAT2Q96F10 170 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-204ENST00000439619 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
CCDC78-204ENST00000439619 TRAV5A0A0B4J249 113 aa13.29□□□□□ -0.28
CCDC78-204ENST00000439619 E5RGE8 158 aa13.29□□□□□ -0.28
CCDC78-204ENST00000439619 PRAF2O60831 178 aa13.29□□□□□ -0.28
CCDC78-204ENST00000439619 UPK1BO75841 260 aa13.29□□□□□ -0.28
CCDC78-204ENST00000439619 ODF3Q96PU9 254 aa13.29□□□□□ -0.28
CCDC78-204ENST00000439619 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
CCDC78-204ENST00000439619 VPS13DQ5THJ4 4388 aa13.28□□□□□ -0.28
CCDC78-204ENST00000439619 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-204ENST00000439619 MRPL53Q96EL3 112 aaKnown RBP13.28□□□□□ -0.28
CCDC78-204ENST00000439619 TMEM14CQ9P0S9 112 aa13.28□□□□□ -0.28
CCDC78-204ENST00000439619 PRELID1Q9Y255 219 aa13.28□□□□□ -0.28
CCDC78-204ENST00000439619 IGLV2-18A0A075B6J9 118 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 TRBV19A0A075B6N1 114 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 PLAC8L1A1L4L8 177 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 PRAC2D3DTV9 90 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 HIST1H1EP10412 219 aaKnown RBP13.27□□□□□ -0.29
CCDC78-204ENST00000439619 PDE6HQ13956 83 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 FCN2Q15485 313 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 GFI1BQ5VTD9 330 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 RNASE8Q8TDE3 154 aaKnown RBP13.27□□□□□ -0.29
CCDC78-204ENST00000439619 NPCDR1Q9BY65 106 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 NMES1Q9C002 83 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 AAMDCQ9H7C9 122 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
CCDC78-204ENST00000439619 ZNF586Q9NXT0 402 aa13.27□□□□□ -0.29
CCDC78-204ENST00000439619 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
CCDC78-204ENST00000439619 SNURFLB1AK76 121 aa13.26□□□□□ -0.29
CCDC78-204ENST00000439619 NPIPB6E9PJ23 425 aa13.26□□□□□ -0.29
CCDC78-204ENST00000439619 NUDT3O95989 172 aa13.26□□□□□ -0.29
CCDC78-204ENST00000439619 LRRC37A5PQ49AS3 106 aa13.26□□□□□ -0.29
CCDC78-204ENST00000439619 OR5C1Q8NGR4 320 aa13.26□□□□□ -0.29
CCDC78-204ENST00000439619 J3KRW8 73 aa13.25□□□□□ -0.29
CCDC78-204ENST00000439619 CCL18P55774 89 aa13.25□□□□□ -0.29
CCDC78-204ENST00000439619 DEFA1P59665 94 aa13.25□□□□□ -0.29
CCDC78-204ENST00000439619 DEFA3P59666 94 aa13.25□□□□□ -0.29
CCDC78-204ENST00000439619 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
CCDC78-204ENST00000439619 FRAS1Q86XX4 4008 aa13.25□□□□□ -0.29
CCDC78-204ENST00000439619 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 C17orf112F2Z3M2 114 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 SIX6O95475 246 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
CCDC78-204ENST00000439619 PET100P0DJ07 73 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 CT45A10P0DMU9 189 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 NHLH2Q02577 135 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 LINC00477Q96M19 166 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 PARD6GQ9BYG4 376 aaPredicted RBP13.24□□□□□ -0.29
CCDC78-204ENST00000439619 PTTG2Q9NZH5 202 aa13.24□□□□□ -0.29
CCDC78-204ENST00000439619 CLINT1Q14677 625 aa13.23□□□□□ -0.29
CCDC78-204ENST00000439619 KIR3DS1Q14943 382 aa13.23□□□□□ -0.29
CCDC78-204ENST00000439619 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
CCDC78-204ENST00000439619 OR5I1Q13606 314 aa13.22□□□□□ -0.29
CCDC78-204ENST00000439619 C1orf134Q5TEV5 83 aa13.22□□□□□ -0.29
CCDC78-204ENST00000439619 Q6ZR54 194 aa13.22□□□□□ -0.29
CCDC78-204ENST00000439619 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 M0R3E3 92 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 RTL8CO15255 209 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 SSNA1O43805 119 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 PYYP10082 97 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 ZNF680Q8NEM1 530 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 MRPL32Q9BYC8 188 aaKnown RBP13.21□□□□□ -0.29
CCDC78-204ENST00000439619 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.29
CCDC78-204ENST00000439619 C7orf71A4D174 169 aa13.2□□□□□ -0.3
CCDC78-204ENST00000439619 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
CCDC78-204ENST00000439619 GNPNAT1Q96EK6 184 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-204ENST00000439619 WDR61Q9GZS3 305 aaKnown RBP13.2□□□□□ -0.3
CCDC78-204ENST00000439619 OR51M1Q9H341 326 aa13.2□□□□□ -0.3
CCDC78-204ENST00000439619 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 A6NHS1 94 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 GAGE7O76087 117 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 NDUFB4O95168 129 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 GPX1P07203 203 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 M6PRP20645 277 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 ICAM4Q14773 271 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 EXOC3-AS1Q8N2X6 119 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms