RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 AMTNQ6UX39 209 aa14.17□□□□□ -0.14
SEMA3B-206ENST00000439487 ARPC5LQ9BPX5 153 aa14.17□□□□□ -0.14
SEMA3B-206ENST00000439487 C1QTNF4Q9BXJ3 329 aa14.17□□□□□ -0.14
SEMA3B-206ENST00000439487 A0A0J9YWU9 116 aa14.16□□□□□ -0.14
SEMA3B-206ENST00000439487 HMGB3O15347 200 aaKnown RBP14.16□□□□□ -0.14
SEMA3B-206ENST00000439487 UBE2L3P68036 154 aaKnown RBP14.16□□□□□ -0.14
SEMA3B-206ENST00000439487 TCTE3Q8IZS6 198 aa14.16□□□□□ -0.14
SEMA3B-206ENST00000439487 EXOC3-AS1Q8N2X6 119 aa14.16□□□□□ -0.14
SEMA3B-206ENST00000439487 RPP25LQ8N5L8 163 aaKnown RBP14.16□□□□□ -0.14
SEMA3B-206ENST00000439487 A0A0D9SG52 128 aa14.15□□□□□ -0.14
SEMA3B-206ENST00000439487 M0R3E3 92 aa14.15□□□□□ -0.14
SEMA3B-206ENST00000439487 MBP02144 154 aa14.15□□□□□ -0.14
SEMA3B-206ENST00000439487 CDC34P49427 236 aaPredicted RBP14.15□□□□□ -0.14
SEMA3B-206ENST00000439487 PHYHIPLQ96FC7 376 aa14.15□□□□□ -0.14
SEMA3B-206ENST00000439487 ICAM4Q14773 271 aa14.14□□□□□ -0.15
SEMA3B-206ENST00000439487 AAMDCQ9H7C9 122 aa14.14□□□□□ -0.15
SEMA3B-206ENST00000439487 PRELID1Q9Y255 219 aa14.14□□□□□ -0.15
SEMA3B-206ENST00000439487 A0A1B0GVG6 124 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 M0R2Z0 102 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 SPINK13Q1W4C9 94 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 PQLC2Q6ZP29 291 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 OR10J6PQ8NGY7 276 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 MUC7Q8TAX7 377 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 RAB24Q969Q5 203 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 MRPL53Q96EL3 112 aaKnown RBP14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 PPP1R14DQ9NXH3 145 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 X6R8D5 127 aa14.13□□□□□ -0.15
SEMA3B-206ENST00000439487 KANTRA0A1W2PQU2 76 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 ZNF705EA8MWA4 302 aaPredicted RBP14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 DEFB4AO15263 64 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 BCL2L11O43521 198 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 STAG3L2P0CL84 134 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 STAG3L3P0CL85 134 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 RANP62826 216 aaKnown RBP14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 TMUB2Q71RG4 321 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 AKAP14Q86UN6 197 aa14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 ACTR3CQ9C0K3 210 aaPredicted RBP14.12□□□□□ -0.15
SEMA3B-206ENST00000439487 BOLA2-SMG1P6H3BVE0 249 aa14.11□□□□□ -0.15
SEMA3B-206ENST00000439487 ARL14EPLP0DKL9 152 aa14.11□□□□□ -0.15
SEMA3B-206ENST00000439487 SSX7Q7RTT5 188 aa14.11□□□□□ -0.15
SEMA3B-206ENST00000439487 ZNF471Q9BX82 626 aaPredicted RBP14.11□□□□□ -0.15
SEMA3B-206ENST00000439487 Q9H3A6 140 aa14.11□□□□□ -0.15
SEMA3B-206ENST00000439487 IGHV3OR16-12A0A075B7B8 117 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 PFDN1O60925 122 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 C1QBP02746 253 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 ERCC8Q13216 396 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 AKR1C8PQ5T2L2 129 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 C1orf158Q8N1D5 194 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 STARD9Q9P2P6 4700 aa14.1□□□□□ -0.15
SEMA3B-206ENST00000439487 TRAV12-2A0A075B6T6 113 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 IGHV4-28A0A0C4DH34 117 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 NPIPB6E9PJ23 425 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 CRXO43186 299 aaPredicted RBP14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 AMBPP02760 352 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 CD300CQ08708 224 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 ZNF726P1Q15940 193 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 LGALSLQ3ZCW2 172 aaPredicted RBP14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 ZNF705AQ6ZN79 300 aaPredicted RBP14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 BAP18Q8IXM2 172 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 LYPD1Q8N2G4 141 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 Q8NAQ8 132 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 IGF2BP2-AS1Q96M15 143 aa14.09□□□□□ -0.15
SEMA3B-206ENST00000439487 CSMD3Q7Z407 3707 aa14.08□□□□□ -0.15
SEMA3B-206ENST00000439487 C3orf84H3BNL1 204 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 RBMY1A1P0DJD3 496 aaKnown RBP14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 RBMY1CP0DJD4 496 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 CT45A10P0DMU9 189 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 MIFP14174 115 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 GCHFRP30047 84 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 RBMY1FQ15415 496 aaKnown RBP14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 ZFAND6Q6FIF0 208 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 IL17DQ8TAD2 202 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 C11orf68Q9H3H3 251 aaKnown RBP14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 GOLT1BQ9Y3E0 138 aa14.08□□□□□ -0.16
SEMA3B-206ENST00000439487 IGKV2-40A0A087WW87 121 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-206ENST00000439487 INSP01308 110 aa14.07□□□□□ -0.16
SEMA3B-206ENST00000439487 IGKV2D-40P01614 121 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-206ENST00000439487 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
SEMA3B-206ENST00000439487 CTXND1A0A1B0GTU2 59 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 PGPA6NDG6 321 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 CXorf1O96002 111 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 CDKN1BP46527 198 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 KIR3DS1Q14943 382 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 HYLS1Q96M11 299 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 NEU1Q99519 415 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 AGPAT4-IT1Q9H0P7 198 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 OTORQ9NRC9 128 aa14.06□□□□□ -0.16
SEMA3B-206ENST00000439487 SEC11BP0C7V7 166 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 CSN1S1P47710 185 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 IQCF2Q8IXL9 164 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 SUN5Q8TC36 379 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 LINC00477Q96M19 166 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 VGLL1Q99990 258 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 TMEM208Q9BTX3 173 aa14.05□□□□□ -0.16
SEMA3B-206ENST00000439487 J3KRW8 73 aa14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 TSPOP30536 169 aa14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 LEPP41159 167 aa14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 FGF8P55075 233 aaPredicted RBP14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 EIF5AP63241 154 aaKnown RBP14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 C9orf47Q6ZRZ4 202 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms