RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 C17orf58Q2M2W7 97 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 ZNF562Q6V9R5 426 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 MBD6Q96DN6 1003 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 NCBP2LA6PVI3 153 aaKnown RBP12.66□□□□□ -0.38
DHFR-201ENST00000439211 IGHV1-46P01743 117 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 ZNF474Q6S9Z5 364 aaPredicted RBP12.66□□□□□ -0.38
DHFR-201ENST00000439211 TMEM14BQ9NUH8 114 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 AGRNO00468 2067 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
DHFR-201ENST00000439211 DLL1O00548 723 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 PRRG2O14669 202 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 WT1P19544 449 aaPredicted RBP12.65□□□□□ -0.38
DHFR-201ENST00000439211 C1orf229Q6ZS94 237 aaPredicted RBP12.65□□□□□ -0.38
DHFR-201ENST00000439211 PPDPFLQ8WWR9 84 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.38
DHFR-201ENST00000439211 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 ARMS2P0C7Q2 107 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 VCX2Q9H322 139 aa12.65□□□□□ -0.38
DHFR-201ENST00000439211 TRBV25-1A0A075B6N4 114 aa12.65□□□□□ -0.39
DHFR-201ENST00000439211 VWC2LB2RUY7 222 aa12.65□□□□□ -0.39
DHFR-201ENST00000439211 SSBP2P81877 361 aaPredicted RBP12.65□□□□□ -0.39
DHFR-201ENST00000439211 ODF1Q14990 250 aa12.65□□□□□ -0.39
DHFR-201ENST00000439211 A8MWV9 139 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 CD69Q07108 199 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 MEIG1Q5JSS6 88 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 TRAV8-1A0A0A6YYK1 113 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 EVI2AP22794 236 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 PRR20EP86478 221 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 PRR20CP86479 221 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 PRR20DP86480 221 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 PRR20BP86481 221 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 PRR20AP86496 221 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 CIARTQ8N365 385 aaPredicted RBP12.64□□□□□ -0.39
DHFR-201ENST00000439211 A0A1B0GXF2 115 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 E9PLD3 99 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 PF4V1P10720 104 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 COX7A1P24310 79 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 LINC00305Q7Z4B0 112 aa12.64□□□□□ -0.39
DHFR-201ENST00000439211 RPUSD1Q9UJJ7 312 aaKnown RBP12.64□□□□□ -0.39
DHFR-201ENST00000439211 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 CRYGCP07315 174 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 CD40P25942 277 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 LYZP61626 148 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 FAM106AQ4KMX7 169 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 PLA2G2CQ5R387 149 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 GOLT1AQ6ZVE7 132 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 ZNF329Q86UD4 541 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 ORMDL3Q8N138 153 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 RBP4P02753 201 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 RRN3P1Q2M238 152 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 IGKCP01834 107 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 IFITM1P13164 125 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 OR4C13Q8NGP0 309 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 DDB2Q92466 427 aa12.63□□□□□ -0.39
DHFR-201ENST00000439211 LOXL1Q08397 574 aaPredicted RBP12.62□□□□□ -0.39
DHFR-201ENST00000439211 KLF17Q5JT82 389 aaPredicted RBP12.62□□□□□ -0.39
DHFR-201ENST00000439211 TWIST1Q15672 202 aa12.62□□□□□ -0.39
DHFR-201ENST00000439211 BOD1L1Q8NFC6 3051 aa12.62□□□□□ -0.39
DHFR-201ENST00000439211 CCDC179H3BU77 68 aa12.62□□□□□ -0.39
DHFR-201ENST00000439211 ZNF503Q96F45 646 aa12.62□□□□□ -0.39
DHFR-201ENST00000439211 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 C16orf97H3BN30 126 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 EMP1P54849 157 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 IGKV1OR2-108A0A075B7D4 117 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
DHFR-201ENST00000439211 MORN5Q5VZ52 161 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 DKK4Q9UBT3 224 aa12.61□□□□□ -0.39
DHFR-201ENST00000439211 ASCL2Q99929 193 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 LOC400499M0QZD8 3231 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 PCSK5Q92824 1860 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 SMKR1H3BMG3 65 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.394e-7■■□□□ 13.7
DHFR-201ENST00000439211 H7C2G1 150 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 ZNF688P0C7X2 276 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 ATP5J2P56134 94 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 Q6AWC8 147 aa12.6□□□□□ -0.39
DHFR-201ENST00000439211 FABP5P3A8MUU1 101 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 DPM2O94777 84 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 NDUFA3O95167 84 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 LEPP41159 167 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 DLX1P56177 255 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 HES1Q14469 280 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 C2orf83Q53S99 150 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
DHFR-201ENST00000439211 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 LINC00312Q9Y6C7 94 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 FAM159AQ6UWV7 190 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 KLF12Q9Y4X4 402 aa12.59□□□□□ -0.39
DHFR-201ENST00000439211 DIAPH2-AS1Q14236 149 aa12.58□□□□□ -0.39
DHFR-201ENST00000439211 Q1RN00 199 aa12.58□□□□□ -0.39
DHFR-201ENST00000439211 GFRALQ6UXV0 394 aa12.58□□□□□ -0.39
DHFR-201ENST00000439211 MYOZ3Q8TDC0 251 aa12.58□□□□□ -0.39
DHFR-201ENST00000439211 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 FNDC10F2Z333 226 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 TM4SF5O14894 197 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 CDIP1Q9H305 208 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms