RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ZNF253O75346 499 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 RAB2AP61019 212 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 GUK1Q16774 197 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 OR2T35Q8NGX2 323 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 SCGB1C1Q8TD33 95 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 TNFSF18Q9UNG2 199 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 ALMS1Q8TCU4 4167 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 FXYD6-FXYD2A0A087WZ82 144 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 C17orf112F2Z3M2 114 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 NBEAP1P0C6P0 100 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 CT45A10P0DMU9 189 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 RHOBP62745 196 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 ERCC8Q13216 396 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 C12orf74Q32Q52 190 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 Q6ZTC4 211 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 PHYHIPLQ96FC7 376 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 MRPL32Q9BYC8 188 aaKnown RBP9.5□□□□□ -0.89
LINC00399-201ENST00000439008 SH3BGRL3Q9H299 93 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 OR51M1Q9H341 326 aa9.5□□□□□ -0.89
LINC00399-201ENST00000439008 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
LINC00399-201ENST00000439008 NPIPB6E9PJ23 425 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 AZU1P20160 251 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 EMP1P54849 157 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 ICAM4Q14773 271 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 RPP25LQ8N5L8 163 aaKnown RBP9.49□□□□□ -0.89
LINC00399-201ENST00000439008 HSD17B11Q8NBQ5 300 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 RNF141Q8WVD5 230 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 ASB13Q8WXK3 278 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 PAXXQ9BUH6 204 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 KCNIP2Q9NS61 270 aa9.49□□□□□ -0.89
LINC00399-201ENST00000439008 PLAC8L1A1L4L8 177 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 ATP6V0CP27449 155 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 PDE6HQ13956 83 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 RPL7L1Q6DKI1 246 aaKnown RBP9.48□□□□□ -0.89
LINC00399-201ENST00000439008 OR11H4Q8NGC9 324 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 GOLT1BQ9Y3E0 138 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 TIMM9Q9Y5J7 89 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
LINC00399-201ENST00000439008 IGKV2-40A0A087WW87 121 aaPredicted RBP9.47□□□□□ -0.89
LINC00399-201ENST00000439008 SMIM9A6NGZ8 99 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
LINC00399-201ENST00000439008 OR7C2O60412 319 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 INSP01308 110 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 IGKV2D-40P01614 121 aaPredicted RBP9.47□□□□□ -0.89
LINC00399-201ENST00000439008 AMBPP02760 352 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 M6PRP20645 277 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 SSX7Q7RTT5 188 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 OR10J6PQ8NGY7 276 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
LINC00399-201ENST00000439008 VGLL1Q99990 258 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
LINC00399-201ENST00000439008 LOC102723971A0A1B0GUV8 181 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 J3KRW8 73 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 HBE1P02100 147 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 CDKN1BP46527 198 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 Q6ZQT7 251 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 CYTL1Q9NRR1 136 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
LINC00399-201ENST00000439008 YTHDF2Q9Y5A9 579 aaKnown RBP9.46□□□□□ -0.9
LINC00399-201ENST00000439008 RANP62826 216 aaKnown RBP9.45□□□□□ -0.9
LINC00399-201ENST00000439008 UBE2L3P68036 154 aaKnown RBP9.45□□□□□ -0.9
LINC00399-201ENST00000439008 RRN3P1Q2M238 152 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 ACOT6Q3I5F7 207 aaPredicted RBP9.45□□□□□ -0.9
LINC00399-201ENST00000439008 PRR9Q5T870 116 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 OR10G9Q8NGN4 311 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 OR10G7Q8NGN6 311 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 LINC00476Q8WZB0 136 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 PSMG3Q9BT73 122 aaPredicted RBP9.45□□□□□ -0.9
LINC00399-201ENST00000439008 TMEM208Q9BTX3 173 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
LINC00399-201ENST00000439008 ARPC5O15511 151 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 CD300CQ08708 224 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 ZNF266Q14584 549 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 KHDC3LQ587J8 217 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 C9orf47Q6ZRZ4 202 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 INO80EQ8NBZ0 244 aaPredicted RBP9.44□□□□□ -0.9
LINC00399-201ENST00000439008 LINC01587Q99440 93 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 Q9H3A6 140 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
LINC00399-201ENST00000439008 KLK5Q9Y337 293 aaPredicted RBP9.44□□□□□ -0.9
LINC00399-201ENST00000439008 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 TRAV12-3A0A0B4J271 114 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 ZNF726P1Q15940 193 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 RAB24Q969Q5 203 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 AAMDCQ9H7C9 122 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
LINC00399-201ENST00000439008 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 A0A1W2PPV4 95 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms