RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SLC38A11Q08AI6 406 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 OR5I1Q13606 314 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 TMEM182Q6ZP80 229 aaPredicted RBP5.46□□□□□ -1.54
VPS50-204ENST00000438395 BPIFA4PQ86YQ2 179 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 TMEM263Q8WUH6 116 aaKnown RBP5.46□□□□□ -1.54
VPS50-204ENST00000438395 GNPNAT1Q96EK6 184 aaPredicted RBP5.46□□□□□ -1.54
VPS50-204ENST00000438395 SMIM8Q96KF7 97 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 ARV1Q9H2C2 271 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 TMPRSS5Q9H3S3 457 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 NOP10Q9NPE3 64 aaKnown RBP5.46□□□□□ -1.54
VPS50-204ENST00000438395 GSKIPQ9P0R6 139 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 PXMP4Q9Y6I8 212 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 DNAH11Q96DT5 4516 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 PMS2P5A8MQ11 134 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 K7EPK0 472 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 TSC22D2O75157 780 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 RLN2P04090 185 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 AZU1P20160 251 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 M6PRP20645 277 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 BCAP31P51572 246 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 TAS2R30P59541 319 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 PLP1P60201 277 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 FCN2Q15485 313 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 SSX7Q7RTT5 188 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 LINC00305Q7Z4B0 112 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 C20orf144Q9BQM9 153 aa5.45□□□□□ -1.54
VPS50-204ENST00000438395 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 TRAV26-1A0A087WT03 109 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 FAM25EA8MYX2 175 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 AGPAT2O15120 278 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 PRM2P04554 102 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 OR4E1P0C645 316 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 LEPP41159 167 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 CAV2P51636 162 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 C10orf113Q5VZT2 155 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 TMEM14EPQ6UXP3 125 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 Q6ZRG5 221 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 ZBTB8BQ8NAP8 495 aaPredicted RBP5.44□□□□□ -1.54
VPS50-204ENST00000438395 ZNRF2Q8NHG8 242 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 C17orf77Q96MU5 243 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 GGACTQ9BVM4 153 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 ZNF331Q9NQX6 463 aaPredicted RBP5.44□□□□□ -1.54
VPS50-204ENST00000438395 FLVCR2Q9UPI3 526 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 FAT2Q9NYQ8 4349 aa5.44□□□□□ -1.54
VPS50-204ENST00000438395 TRGV2A0A075B6R0 118 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 GAGE12BA1L429 117 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 PLAC8L1A1L4L8 177 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 H3BTX0 84 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 J3KRW8 73 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 CCNKO75909 580 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 GAGE7O76087 117 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 SNRPCP09234 159 aaKnown RBP5.43□□□□□ -1.54
VPS50-204ENST00000438395 GAGE12FP0CL80 117 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 GAGE12GP0CL81 117 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 GAGE12IP0CL82 117 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 PRB4P10163 310 aaPredicted RBP5.43□□□□□ -1.54
VPS50-204ENST00000438395 PVALBP20472 110 aaPredicted RBP5.43□□□□□ -1.54
VPS50-204ENST00000438395 CAMLGP49069 296 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 ICAM4Q14773 271 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 GUK1Q16774 197 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 CNPY1Q3B7I2 92 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 C12orf45Q8N5I9 185 aaPredicted RBP5.43□□□□□ -1.54
VPS50-204ENST00000438395 NUDT10Q8NFP7 164 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 OR1L4Q8NGR5 311 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 RNASE8Q8TDE3 154 aaKnown RBP5.43□□□□□ -1.54
VPS50-204ENST00000438395 RXFP4Q8TDU9 374 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 ZNF503Q96F45 646 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 NUDT11Q96G61 164 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 PFDN5Q99471 154 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 SRRQ9GZT4 340 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 LINC00588Q9Y4M8 146 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 DNAH2Q9P225 4427 aa5.43□□□□□ -1.54
VPS50-204ENST00000438395 TRAV12-3A0A0B4J271 114 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 A0A0J9YY99 117 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 C5orf51A6NDU8 294 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 ZNF701M0R085 212 aaPredicted RBP5.42□□□□□ -1.54
VPS50-204ENST00000438395 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 S100A10P60903 97 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 HBG1P69891 147 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 HBG2P69892 147 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 OPCMLQ14982 345 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 GFI1BQ5VTD9 330 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 PATE2Q6UY27 113 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 STX12Q86Y82 276 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 MAPKAPK5-AS1Q8N8E1 139 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 ZNF680Q8NEM1 530 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 MITD1Q8WV92 249 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 PYGO2Q9BRQ0 406 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 Q9H8V8 135 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 DNAJC4Q9NNZ3 241 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 UQCC1Q9NVA1 299 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 RCL1Q9Y2P8 373 aaKnown RBP5.42□□□□□ -1.54
VPS50-204ENST00000438395 LSM5Q9Y4Y9 91 aaKnown RBP5.42□□□□□ -1.54
VPS50-204ENST00000438395 MUC4Q99102 2169 aa5.42□□□□□ -1.54
VPS50-204ENST00000438395 DYNC1H1Q14204 4646 aaKnown RBP5.41□□□□□ -1.54
VPS50-204ENST00000438395 DNAH17Q9UFH2 4485 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 UBE2L5PA0A1B0GUS4 154 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 C7orf66A4D0T2 115 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 C9orf118A6NHY6 69 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms