RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 UBE2E2Q96LR5 201 aa5.09□□□□□ -1.59
MCF2-205ENST00000437564 S1PR3Q99500 378 aa5.09□□□□□ -1.59
MCF2-205ENST00000437564 TMEM167BQ9NRX6 74 aa5.09□□□□□ -1.59
MCF2-205ENST00000437564 TDRD6O60522 2096 aaKnown RBP5.09□□□□□ -1.59
MCF2-205ENST00000437564 SCN10AQ9Y5Y9 1956 aa5.09□□□□□ -1.59
MCF2-205ENST00000437564 PLAC8L1A1L4L8 177 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 M0QZQ0 153 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 IGLV2-8P01709 118 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 SLC25A16P16260 332 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.6
MCF2-205ENST00000437564 SERTAD4-AS1Q5TG53 156 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 Q6ZR03 302 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 GPHA2Q96T91 129 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 PAXXQ9BUH6 204 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 DYNLRB1Q9NP97 96 aa5.09□□□□□ -1.6
MCF2-205ENST00000437564 IGKV1D-8A0A087WSZ0 117 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 INS-IGF2F8WCM5 200 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 MRPS12O15235 138 aaKnown RBP5.08□□□□□ -1.6
MCF2-205ENST00000437564 PAX4O43316 350 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 GP1BBP13224 206 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 FCER1GP30273 86 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 DUTP33316 252 aaKnown RBP5.08□□□□□ -1.6
MCF2-205ENST00000437564 SYNJ2BPP57105 145 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 Q6ZVL8 140 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 U3KQE9 123 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 ARHGAP21Q5T5U3 1957 aa5.08□□□□□ -1.6
MCF2-205ENST00000437564 IGLV3-10A0A075B6K4 115 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 IGKV2D-26A0A0A0MRZ7 120 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 A0A0D9SEW6 157 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 TEX49A0A1B0GTD5 131 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 FOXS1O43638 330 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 SNRNP200O75643 2136 aaKnown RBP5.07□□□□□ -1.6
MCF2-205ENST00000437564 CISD3P0C7P0 127 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 ZNF883P0CG24 379 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 CFHR3Q02985 330 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 BEAN1Q3B7T3 259 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 TMEM52BQ4KMG9 183 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 SPANXN5Q5MJ07 72 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 FP248Q71RG6 208 aaPredicted RBP5.07□□□□□ -1.6
MCF2-205ENST00000437564 NDUFA11Q86Y39 141 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 PLXDC1Q8IUK5 500 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 ZNF799Q96GE5 643 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 METTL26Q96S19 204 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 PHPT1Q9NRX4 125 aaPredicted RBP5.07□□□□□ -1.6
MCF2-205ENST00000437564 TRIP12Q14669 1992 aaPredicted RBP5.07□□□□□ -1.6
MCF2-205ENST00000437564 A0A0G2JNJ9 132 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 A0A1B0GWA3 101 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 SS18L1O75177 396 aaPredicted RBP5.07□□□□□ -1.6
MCF2-205ENST00000437564 GLI4P10075 376 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 APOC4P55056 127 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 RPS18P62269 152 aaKnown RBP5.07□□□□□ -1.6
MCF2-205ENST00000437564 FOXF2Q12947 444 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 ORMDL2Q53FV1 153 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 MDP1Q86V88 176 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 C11orf45Q8TAV5 145 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 CYSTM1Q9H1C7 97 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 Q9UFV3 132 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 WDR83OSQ9Y284 106 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 SLC25A15Q9Y619 301 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 MGAMO43451 1857 aa5.07□□□□□ -1.6
MCF2-205ENST00000437564 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
MCF2-205ENST00000437564 IGHV1-58A0A0C4DH39 117 aa5.06□□□□□ -1.6
MCF2-205ENST00000437564 KLHDC9Q8NEP7 349 aa5.06□□□□□ -1.6
MCF2-205ENST00000437564 SSMEM1Q8WWF3 244 aa5.06□□□□□ -1.6
MCF2-205ENST00000437564 TMEM243Q9BU79 118 aa5.06□□□□□ -1.6
MCF2-205ENST00000437564 ZNF355PQ9NSJ1 428 aa5.06□□□□□ -1.6
MCF2-205ENST00000437564 ARID1BQ8NFD5 2236 aaPredicted RBP5.06□□□□□ -1.6
MCF2-205ENST00000437564 COL16A1Q07092 1604 aaPredicted RBP5.06□□□□□ -1.6
MCF2-205ENST00000437564 IGLV3-16A0A075B6K0 115 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 TRAV41A0A0B4J266 112 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 IAPPP10997 89 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 KIF26BQ2KJY2 2108 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 RPP25Q9BUL9 199 aaKnown RBP5.05□□□□□ -1.6
MCF2-205ENST00000437564 PRO1854Q9UHT4 67 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 A0A096LNJ9 63 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 WI2-2373I1.2A0A1W2PRP0 233 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 HMGA1P17096 107 aaKnown RBP5.05□□□□□ -1.6
MCF2-205ENST00000437564 SAA4P35542 130 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 CTXN1P60606 82 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 C2orf82Q6UX34 121 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 FAM168AQ92567 244 aa5.05□□□□□ -1.6
MCF2-205ENST00000437564 TIMM8BQ9Y5J9 83 aaPredicted RBP5.05□□□□□ -1.6
MCF2-205ENST00000437564 MYO9BQ13459 2157 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 PCNX3Q9H6A9 2034 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 LINC00473A8K010 186 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 PMS2P5A8MQ11 134 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 NGFP01138 241 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 ZNF823P16415 610 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 CCL1P22362 96 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 PLNP26678 52 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 ZNF138P52744 262 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 TFF3Q07654 80 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 ZNF497Q6ZNH5 498 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 C9orf139Q6ZV77 190 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 SFTPA2Q8IWL1 248 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 SFTPA1Q8IWL2 248 aa5.04□□□□□ -1.6
MCF2-205ENST00000437564 Q8N3U1 123 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms