RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ATP5G3P48201 142 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 PPT1P50897 306 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 CD81P60033 236 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 RANP62826 216 aaKnown RBP5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 DEFB114Q30KQ6 69 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 IGFL4Q6B9Z1 124 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 SIGLEC15Q6ZMC9 328 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 TCF24Q7RTU0 167 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 EIF4E3Q8N5X7 224 aaKnown RBP5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 RXFP4Q8TDU9 374 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 WWC2-AS2Q96NR7 200 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 EIF5A2Q9GZV4 153 aaKnown RBP5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 TMEM231Q9H6L2 316 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 SIGLEC8Q9NYZ4 499 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 VAX2Q9UIW0 290 aa5.29□□□□□ -1.56
LSM3P3-201ENST00000436601 MAST4O15021 2626 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 HELTA6NFD8 242 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 M0QZ24 198 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 SOCS3O14543 225 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 ZNF253O75346 499 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 IFNA1P01562 189 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 BMI1P35226 326 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 MEF2BQ02080 365 aaPredicted RBP5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 PEA15Q15121 130 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 ZNF124Q15973 351 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 NDUFA5Q16718 116 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 CST9LP1Q5W188 147 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 EXOC3-AS1Q8N2X6 119 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 Q9H3A6 140 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 ZNF331Q9NQX6 463 aaPredicted RBP5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 ARL2-SNX15V9GYD0 113 aa5.28□□□□□ -1.56
LSM3P3-201ENST00000436601 IGKV3-7A0A075B6H7 116 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 PGPA6NDG6 321 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 C11orf94C9JXX5 98 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 SRP19P09132 144 aaKnown RBP5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 HLA-DMBP28068 263 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 TAGLN2P37802 199 aaKnown RBP5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 MEOX2P50222 304 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 PDE6HQ13956 83 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 UQCC3Q6UW78 93 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 Q6ZWC4 215 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 TMEM61Q8N0U2 210 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 LYPD1Q8N2G4 141 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 GBGT1Q8N5D6 347 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 WFDC9Q8NEX5 89 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 DCANP1Q8TF63 244 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 MS4A6AQ9H2W1 248 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 TREM1Q9NP99 234 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 NRN1Q9NPD7 142 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 OTORQ9NRC9 128 aa5.27□□□□□ -1.57
LSM3P3-201ENST00000436601 IZUMO1RA6ND01 250 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 K7EQG2 157 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 M0R3E3 92 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 SAP30O75446 220 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 IGLV1-51P01701 117 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 PRB4P10163 310 aaPredicted RBP5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 TFPI2P48307 235 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 GNG5P63218 68 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 PSG9Q00887 426 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 FAM24BQ8N5W8 94 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 RNF182Q8N6D2 247 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 DYNLRB2Q8TF09 96 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 C11orf52Q96A22 123 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 C20orf173Q96LM9 149 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 TXNDC17Q9BRA2 123 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 SLC50A1Q9BRV3 221 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 NKX6-2Q9C056 277 aaPredicted RBP5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 SMDT1Q9H4I9 107 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 EPDR1Q9UM22 224 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 FBN1P35555 2871 aaKnown RBP5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 NF1P21359 2839 aa5.26□□□□□ -1.57
LSM3P3-201ENST00000436601 C2CD3Q4AC94 2353 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 TRAV25A0A0B4J276 109 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 TMEM218A2RU14 115 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF705FA8MVS1 300 aaPredicted RBP5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 PRAC2D3DTV9 90 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 F6UZH7 168 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 ISLRO14498 428 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 PDE6DO43924 150 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 NDUFS6O75380 124 aaKnown RBP5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 TCRAP04437 139 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 SLC25A5P05141 298 aaKnown RBP5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 SFTA3P0C7M3 94 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 LCN12Q6JVE5 192 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 RBPMS2Q6ZRY4 209 aaKnown RBP5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 CYB561D1Q8N8Q1 229 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 C5orf17Q8NAS9 161 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 LINC00479Q96M42 142 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 SLC35B3Q9H1N7 401 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 AAMDCQ9H7C9 122 aa5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
LSM3P3-201ENST00000436601 TRAV2A0A0B4J234 112 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 TMEM250H0YL14 139 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 DNASE2O00115 360 aaPredicted RBP5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 PEX7O00628 323 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 IGLV2-11P01706 119 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 NPSP0C0P6 89 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 ADCYAP1P18509 176 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 RIPPLY3P57055 190 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms