RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 RNF126Q9BV68 326 aa13.07□□□□□ -0.32
HMGN1-207ENST00000436324 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
HMGN1-207ENST00000436324 MPDU1O75352 247 aa13.06□□□□□ -0.32
HMGN1-207ENST00000436324 HTN3P15516 51 aa13.06□□□□□ -0.32
HMGN1-207ENST00000436324 OR10J6PQ8NGY7 276 aa13.06□□□□□ -0.32
HMGN1-207ENST00000436324 LINC01587Q99440 93 aa13.06□□□□□ -0.32
HMGN1-207ENST00000436324 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-207ENST00000436324 HTN1P15515 57 aa13.05□□□□□ -0.32
HMGN1-207ENST00000436324 GUK1Q16774 197 aa13.05□□□□□ -0.32
HMGN1-207ENST00000436324 TEX48A0A1B0GUV7 120 aa13.04□□□□□ -0.32
HMGN1-207ENST00000436324 MPC2O95563 127 aa13.04□□□□□ -0.32
HMGN1-207ENST00000436324 PYYP10082 97 aa13.04□□□□□ -0.32
HMGN1-207ENST00000436324 AZU1P20160 251 aa13.04□□□□□ -0.32
HMGN1-207ENST00000436324 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
HMGN1-207ENST00000436324 BLNKQ8WV28 456 aa13.04□□□□□ -0.32
HMGN1-207ENST00000436324 WDR61Q9GZS3 305 aaKnown RBP13.04□□□□□ -0.32
HMGN1-207ENST00000436324 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 J3KRW8 73 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 CDKN1BP46527 198 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 DAD1P61803 113 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 NDUFAF3Q9BU61 184 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 SMIM3Q9BZL3 60 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
HMGN1-207ENST00000436324 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
HMGN1-207ENST00000436324 ATP5SQ99766 215 aa13.02□□□□□ -0.33
HMGN1-207ENST00000436324 SLC25A2Q9BXI2 301 aa13.02□□□□□ -0.33
HMGN1-207ENST00000436324 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
HMGN1-207ENST00000436324 MBD2Q9UBB5 411 aa13.02□□□□□ -0.33
HMGN1-207ENST00000436324 HSPB11Q9Y547 144 aa13.02□□□□□ -0.33
HMGN1-207ENST00000436324 ALG5Q9Y673 324 aa13.02□□□□□ -0.33
HMGN1-207ENST00000436324 M0R3E3 92 aa13.01□□□□□ -0.33
HMGN1-207ENST00000436324 PET100P0DJ07 73 aa13.01□□□□□ -0.33
HMGN1-207ENST00000436324 FCN2Q15485 313 aa13.01□□□□□ -0.33
HMGN1-207ENST00000436324 TMEM256Q8N2U0 113 aa13.01□□□□□ -0.33
HMGN1-207ENST00000436324 ZNF253O75346 499 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 NDUFB4O95168 129 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 CT45A10P0DMU9 189 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 DEFB130BP0DP73 79 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 DEFB130AP0DP74 79 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 RPL12P30050 165 aaKnown RBP13□□□□□ -0.33
HMGN1-207ENST00000436324 TSPOP30536 169 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 TAS2R60P59551 318 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 EXOC3-AS1Q8N2X6 119 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 FAM167A-AS1Q96KT0 104 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 KCNIP2Q9NS61 270 aa13□□□□□ -0.33
HMGN1-207ENST00000436324 C17orf112F2Z3M2 114 aa12.99□□□□□ -0.33
HMGN1-207ENST00000436324 ERCC8Q13216 396 aa12.99□□□□□ -0.33
HMGN1-207ENST00000436324 OXA1LQ15070 435 aa12.99□□□□□ -0.33
HMGN1-207ENST00000436324 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
HMGN1-207ENST00000436324 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
HMGN1-207ENST00000436324 PLAC8L1A1L4L8 177 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 LYRM9A8MSI8 78 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 NPIPB6E9PJ23 425 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 IFNA5P01569 189 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 LEPP41159 167 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 FFAR4Q5NUL3 377 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 OR51M1Q9H341 326 aa12.98□□□□□ -0.33
HMGN1-207ENST00000436324 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
HMGN1-207ENST00000436324 H7BYZ3 331 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 OR10J4P0C629 311 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 NBEAP1P0C6P0 100 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 PDE6HQ13956 83 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 ICAM4Q14773 271 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 MRPL53Q96EL3 112 aaKnown RBP12.97□□□□□ -0.33
HMGN1-207ENST00000436324 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 PAXXQ9BUH6 204 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 MRPL32Q9BYC8 188 aaKnown RBP12.97□□□□□ -0.33
HMGN1-207ENST00000436324 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 WFDC1Q9HC57 220 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 FUT9Q9Y231 359 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 PRELID1Q9Y255 219 aa12.97□□□□□ -0.33
HMGN1-207ENST00000436324 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 TRAV12-3A0A0B4J271 114 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 PTTG1O95997 202 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 P0DMU3 169 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 FAM231AP0DMU4 169 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 FAM231CP0DMU5 169 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 TMEM88Q6PEY1 159 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 RNF141Q8WVD5 230 aa12.96□□□□□ -0.33
HMGN1-207ENST00000436324 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-207ENST00000436324 OR7C2O60412 319 aa12.95□□□□□ -0.34
HMGN1-207ENST00000436324 EIF3GO75821 320 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGN1-207ENST00000436324 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-207ENST00000436324 FXYD5Q96DB9 178 aa12.95□□□□□ -0.34
HMGN1-207ENST00000436324 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
HMGN1-207ENST00000436324 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
HMGN1-207ENST00000436324 AGPAT4-IT1Q9H0P7 198 aa12.95□□□□□ -0.34
HMGN1-207ENST00000436324 MED28Q9H204 178 aa12.95□□□□□ -0.34
HMGN1-207ENST00000436324 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
HMGN1-207ENST00000436324 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-207ENST00000436324 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
HMGN1-207ENST00000436324 CCDC28AQ8IWP9 274 aa12.94□□□□□ -0.34
HMGN1-207ENST00000436324 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
HMGN1-207ENST00000436324 RNASE8Q8TDE3 154 aaKnown RBP12.94□□□□□ -0.34
HMGN1-207ENST00000436324 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
HMGN1-207ENST00000436324 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
HMGN1-207ENST00000436324 VPS13DQ5THJ4 4388 aa12.93□□□□□ -0.34
HMGN1-207ENST00000436324 F5H768 121 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms