RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 FAM110AQ9BQ89 295 aa17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 OR11H12B2RN74 326 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 M0R3E3 92 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 CD7P09564 240 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 ATP5G3P48201 142 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 C5orf17Q8NAS9 161 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 FAM210AQ96ND0 272 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 TXNDC17Q9BRA2 123 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 VAX2Q9UIW0 290 aa17.29■□□□□ 0.36
SMARCAL1-208ENST00000434435 LOC102723971A0A1B0GUV8 181 aa17.28■□□□□ 0.36
SMARCAL1-208ENST00000434435 C11orf94C9JXX5 98 aa17.28■□□□□ 0.36
SMARCAL1-208ENST00000434435 KRTAP10-11P60412 298 aa17.28■□□□□ 0.36
SMARCAL1-208ENST00000434435 RXFP4Q8TDU9 374 aa17.28■□□□□ 0.36
SMARCAL1-208ENST00000434435 RPUSD4Q96CM3 377 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-208ENST00000434435 RBFOX3A6NFN3 312 aa17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 ZNF705FA8MVS1 300 aaPredicted RBP17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 MEF2BQ02080 365 aaPredicted RBP17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 TOR2AQ5JU69 321 aa17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 ARL6IP6Q8N6S5 226 aa17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 TCEAL7Q9BRU2 100 aa17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 RPH3ALQ9UNE2 315 aa17.27■□□□□ 0.36
SMARCAL1-208ENST00000434435 AGRNO00468 2067 aa17.26■□□□□ 0.35
SMARCAL1-208ENST00000434435 ZNF506Q5JVG8 444 aa17.26■□□□□ 0.35
SMARCAL1-208ENST00000434435 PRR25Q96S07 402 aa17.26■□□□□ 0.35
SMARCAL1-208ENST00000434435 EIF5A2Q9GZV4 153 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-208ENST00000434435 GNG5P63218 68 aa17.25■□□□□ 0.35
SMARCAL1-208ENST00000434435 CCDC28AQ8IWP9 274 aa17.25■□□□□ 0.35
SMARCAL1-208ENST00000434435 C19orf73Q9NVV2 129 aa17.25■□□□□ 0.35
SMARCAL1-208ENST00000434435 DIRC3C9JPN6 131 aa17.24■□□□□ 0.35
SMARCAL1-208ENST00000434435 EBLN2Q6P2I7 272 aa17.24■□□□□ 0.35
SMARCAL1-208ENST00000434435 FOXI2Q6ZQN5 318 aa17.24■□□□□ 0.35
SMARCAL1-208ENST00000434435 APRG1Q8IVJ8 170 aa17.24■□□□□ 0.35
SMARCAL1-208ENST00000434435 RARRES2Q99969 163 aa17.24■□□□□ 0.35
SMARCAL1-208ENST00000434435 EPDR1Q9UM22 224 aa17.24■□□□□ 0.35
SMARCAL1-208ENST00000434435 MGAM2Q2M2H8 2515 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 PRAC2D3DTV9 90 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 F6UZH7 168 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 PEX7O00628 323 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 DEFB1P60022 68 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 KPRPQ5T749 579 aaPredicted RBP17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 OR8A1Q8NGG7 326 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 HIST1H2BAQ96A08 127 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 ATG101Q9BSB4 218 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 WFDC10AQ9H1F0 79 aa17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 SAV1Q9H4B6 383 aaPredicted RBP17.23■□□□□ 0.35
SMARCAL1-208ENST00000434435 SERTM2A0A1B0GWG4 89 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 F6UB75 175 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 PDE6DO43924 150 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 TCRAP04437 139 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 PRB4P10163 310 aaPredicted RBP17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 ZNF124Q15973 351 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 GOLT1AQ6ZVE7 132 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 OR10J6PQ8NGY7 276 aa17.22■□□□□ 0.35
SMARCAL1-208ENST00000434435 DNHD1Q96M86 4753 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 IGKV2-40A0A087WW87 121 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 A0A0J9YX75 114 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 KNCNA6PVL3 124 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 K7EQM0 130 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 IGKV2D-40P01614 121 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 HIST1H1AQ02539 215 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 ACTL10Q5JWF8 245 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 CYB561D1Q8N8Q1 229 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 MED9Q9NWA0 146 aa17.21■□□□□ 0.35
SMARCAL1-208ENST00000434435 SCO2A0A1W2PP80 73 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 RAB19A4D1S5 217 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 RBAKDNA6NC62 111 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 DUSP14O95147 198 aaKnown RBP17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 HLA-DRB4P13762 266 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 PEA15Q15121 130 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 GDF5OSQ5U4N7 250 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 Q8N1Y9 231 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 HLA-DRB4X5D2U9 266 aa17.2■□□□□ 0.34
SMARCAL1-208ENST00000434435 LINC00862A6NCI5 91 aa17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 NDUFS6O75380 124 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 ZNF705DP0CH99 300 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 ZNF705BP0CI00 300 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 AKR1C3P42330 323 aa17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 DEFB125Q8N687 156 aa17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 C11orf52Q96A22 123 aa17.19■□□□□ 0.34
SMARCAL1-208ENST00000434435 STHQ8IWL8 128 aa17.18■□□□□ 0.34
SMARCAL1-208ENST00000434435 NPIPB6E9PJ23 425 aa17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 CNN1P51911 297 aaKnown RBP17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 COMMD7Q86VX2 200 aa17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 TMEM75Q8N9X5 138 aa17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 SMDT1Q9H4I9 107 aa17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 SRD5A3Q9H8P0 318 aa17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 DNAH3Q8TD57 4116 aa17.17■□□□□ 0.34
SMARCAL1-208ENST00000434435 NOTCH1P46531 2555 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 TMEM250H0YL14 139 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 H3BMM0 161 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 ERCC8Q13216 396 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 TMEM78Q5T7P6 136 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 C9orf47Q6ZRZ4 202 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 OR4B1Q8NGF8 309 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 C2CD4CQ8TF44 421 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 CITED4Q96RK1 184 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 VGLL1Q99990 258 aa17.16■□□□□ 0.34
SMARCAL1-208ENST00000434435 FBLL1A6NHQ2 334 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-208ENST00000434435 SRSF3P84103 164 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-208ENST00000434435 LINC00477Q96M19 166 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms