RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 MRPL53Q96EL3 112 aaKnown RBP13.31□□□□□ -0.28
HLA-F-220ENST00000434407 PAXXQ9BUH6 204 aa13.31□□□□□ -0.28
HLA-F-220ENST00000434407 MFFQ9GZY8 342 aa13.31□□□□□ -0.28
HLA-F-220ENST00000434407 KMT2CQ8NEZ4 4911 aaKnown RBP13.3□□□□□ -0.28
HLA-F-220ENST00000434407 PRAC2D3DTV9 90 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 ARPC5O15511 151 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 MIFP14174 115 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 FXYD7P58549 80 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 RAB2AP61019 212 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 SERF2P84101 59 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 LGALSLQ3ZCW2 172 aaPredicted RBP13.3□□□□□ -0.28
HLA-F-220ENST00000434407 C9orf62Q8N4C0 152 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 RNF141Q8WVD5 230 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 NEU1Q99519 415 aa13.3□□□□□ -0.28
HLA-F-220ENST00000434407 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
HLA-F-220ENST00000434407 TAAR5O14804 337 aa13.29□□□□□ -0.28
HLA-F-220ENST00000434407 AMBPP02760 352 aa13.29□□□□□ -0.28
HLA-F-220ENST00000434407 TAS2R45P59539 299 aa13.29□□□□□ -0.28
HLA-F-220ENST00000434407 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
HLA-F-220ENST00000434407 KHDC3LQ587J8 217 aa13.29□□□□□ -0.28
HLA-F-220ENST00000434407 PRELID1Q9Y255 219 aa13.29□□□□□ -0.28
HLA-F-220ENST00000434407 DYNC2H1Q8NCM8 4307 aaKnown RBP13.28□□□□□ -0.28
HLA-F-220ENST00000434407 CRXO43186 299 aaPredicted RBP13.28□□□□□ -0.28
HLA-F-220ENST00000434407 OR7C2O60412 319 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 RBMY1A1P0DJD3 496 aaKnown RBP13.28□□□□□ -0.28
HLA-F-220ENST00000434407 RBMY1CP0DJD4 496 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 ZNF345Q14585 488 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 RBMY1FQ15415 496 aaKnown RBP13.28□□□□□ -0.28
HLA-F-220ENST00000434407 OR10G4Q8NGN3 311 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 OR10G9Q8NGN4 311 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 OR10G7Q8NGN6 311 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 BLNKQ8WV28 456 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 GNPNAT1Q96EK6 184 aaPredicted RBP13.28□□□□□ -0.28
HLA-F-220ENST00000434407 SH3BGRL3Q9H299 93 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 CYTL1Q9NRR1 136 aa13.28□□□□□ -0.28
HLA-F-220ENST00000434407 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 M0R3E3 92 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 JTBO76095 146 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 MBP02144 154 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 OR10J4P0C629 311 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 PQLC2Q6ZP29 291 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 C1orf158Q8N1D5 194 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 KCNRGQ8N5I3 272 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 RPP25LQ8N5L8 163 aaKnown RBP13.27□□□□□ -0.29
HLA-F-220ENST00000434407 IGF2BP2-AS1Q96M15 143 aa13.27□□□□□ -0.29
HLA-F-220ENST00000434407 A0A0D9SG52 128 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 A0A1W2PPV4 95 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 M0R2Z0 102 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
HLA-F-220ENST00000434407 SPINK13Q1W4C9 94 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 TMUB2Q71RG4 321 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 LYPD1Q8N2G4 141 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 EXOC3-AS1Q8N2X6 119 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 OR10J6PQ8NGY7 276 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 PHYHIPLQ96FC7 376 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 LYSTQ99698 3801 aa13.26□□□□□ -0.29
HLA-F-220ENST00000434407 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
HLA-F-220ENST00000434407 NPIPB6E9PJ23 425 aa13.25□□□□□ -0.29
HLA-F-220ENST00000434407 UBE2L3P68036 154 aaKnown RBP13.25□□□□□ -0.29
HLA-F-220ENST00000434407 ZFAND6Q6FIF0 208 aa13.25□□□□□ -0.29
HLA-F-220ENST00000434407 FAM122CQ6P4D5 195 aa13.25□□□□□ -0.29
HLA-F-220ENST00000434407 AAMDCQ9H7C9 122 aa13.25□□□□□ -0.29
HLA-F-220ENST00000434407 DEFB4AO15263 64 aa13.24□□□□□ -0.29
HLA-F-220ENST00000434407 EIF3GO75821 320 aaKnown RBP eCLIP13.24□□□□□ -0.29
HLA-F-220ENST00000434407 STAG3L2P0CL84 134 aa13.24□□□□□ -0.29
HLA-F-220ENST00000434407 STAG3L3P0CL85 134 aa13.24□□□□□ -0.29
HLA-F-220ENST00000434407 CDC34P49427 236 aaPredicted RBP13.24□□□□□ -0.29
HLA-F-220ENST00000434407 ICAM4Q14773 271 aa13.24□□□□□ -0.29
HLA-F-220ENST00000434407 ODF3Q96PU9 254 aa13.24□□□□□ -0.29
HLA-F-220ENST00000434407 GOLT1BQ9Y3E0 138 aa13.24□□□□□ -0.29
HLA-F-220ENST00000434407 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
HLA-F-220ENST00000434407 CDKN1BP46527 198 aa13.23□□□□□ -0.29
HLA-F-220ENST00000434407 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
HLA-F-220ENST00000434407 BAP18Q8IXM2 172 aa13.23□□□□□ -0.29
HLA-F-220ENST00000434407 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
HLA-F-220ENST00000434407 RAB24Q969Q5 203 aa13.23□□□□□ -0.29
HLA-F-220ENST00000434407 INSP01308 110 aa13.22□□□□□ -0.29
HLA-F-220ENST00000434407 ARPC5LQ9BPX5 153 aa13.22□□□□□ -0.29
HLA-F-220ENST00000434407 Q9H3A6 140 aa13.22□□□□□ -0.29
HLA-F-220ENST00000434407 PPP1R14DQ9NXH3 145 aa13.22□□□□□ -0.29
HLA-F-220ENST00000434407 TRAV12-2A0A075B6T6 113 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 ARL14EPLP0DKL9 152 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 TSPOP30536 169 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 RANP62826 216 aaKnown RBP13.21□□□□□ -0.29
HLA-F-220ENST00000434407 C9orf47Q6ZRZ4 202 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 C11orf45Q8TAV5 145 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 FAM19A4Q96LR4 140 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 LINC00477Q96M19 166 aa13.21□□□□□ -0.29
HLA-F-220ENST00000434407 IGHV3OR16-12A0A075B7B8 117 aa13.2□□□□□ -0.3
HLA-F-220ENST00000434407 KANTRA0A1W2PQU2 76 aa13.2□□□□□ -0.3
HLA-F-220ENST00000434407 HMGB3O15347 200 aaKnown RBP13.2□□□□□ -0.3
HLA-F-220ENST00000434407 TMEM256Q8N2U0 113 aa13.2□□□□□ -0.3
HLA-F-220ENST00000434407 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-220ENST00000434407 AGPAT4-IT1Q9H0P7 198 aa13.2□□□□□ -0.3
HLA-F-220ENST00000434407 OTORQ9NRC9 128 aa13.2□□□□□ -0.3
HLA-F-220ENST00000434407 TMEM189A5PLL7 270 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 BCL2L11O43521 198 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
HLA-F-220ENST00000434407 ERCC8Q13216 396 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 KIR3DS1Q14943 382 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms