RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PSMB11A5LHX3 300 aa12.27□□□□□ -0.45
SCARF1-203ENST00000434376 RPL11P62913 178 aaKnown RBP12.27□□□□□ -0.45
SCARF1-203ENST00000434376 TMEM30BQ3MIR4 351 aa12.27□□□□□ -0.45
SCARF1-203ENST00000434376 IGHV2-70DA0A0C4DH43 119 aa12.27□□□□□ -0.45
SCARF1-203ENST00000434376 K7EIM0 57 aa12.27□□□□□ -0.45
SCARF1-203ENST00000434376 HIST1H1EP10412 219 aaKnown RBP12.27□□□□□ -0.45
SCARF1-203ENST00000434376 RNF125Q96EQ8 232 aa12.27□□□□□ -0.45
SCARF1-203ENST00000434376 MRPL32Q9BYC8 188 aaKnown RBP12.27□□□□□ -0.45
SCARF1-203ENST00000434376 CST9LQ9H4G1 147 aa12.27□□□□□ -0.45
SCARF1-203ENST00000434376 OR4F17Q8NGA8 305 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 RAB37Q96AX2 223 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 MXRA5Q9NR99 2828 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 TRAV40A0A0B4J280 105 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 CLEC19AQ6UXS0 136 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 CHRDL1Q9BU40 450 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 C2orf70A6NJV1 201 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 GRAMD2BQ96HH9 432 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 IGF2BP2-AS1Q96M15 143 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 TMEM191AQ9H0A3 160 aa12.26□□□□□ -0.45
SCARF1-203ENST00000434376 LOC389332A0A1B0GUA5 103 aa12.25□□□□□ -0.45
SCARF1-203ENST00000434376 SPRY2O43597 315 aa12.25□□□□□ -0.45
SCARF1-203ENST00000434376 CDKN1BP46527 198 aa12.25□□□□□ -0.45
SCARF1-203ENST00000434376 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
SCARF1-203ENST00000434376 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
SCARF1-203ENST00000434376 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
SCARF1-203ENST00000434376 MRPL27Q9P0M9 148 aaKnown RBP12.25□□□□□ -0.45
SCARF1-203ENST00000434376 VWC2LB2RUY7 222 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 PRTN3P24158 256 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 DEFB1P60022 68 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 HBBP68871 147 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 OCIAD2Q56VL3 154 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 RNF182Q8N6D2 247 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 C8orf46Q8TAG6 207 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 C21orf62Q9NYP8 219 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 FN1P02751 2386 aaKnown RBP12.24□□□□□ -0.45
SCARF1-203ENST00000434376 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 I3L2K1 104 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 TCRAP04437 139 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 CLEC3BP05452 202 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 TM4SF20Q53R12 229 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 MAP1LC3CQ9BXW4 147 aa12.24□□□□□ -0.45
SCARF1-203ENST00000434376 ZNF785A8K8V0 405 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 TOMM40O96008 361 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 PSG9Q00887 426 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 BPIFA4PQ86YQ2 179 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 WFDC12Q8WWY7 111 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 DUX5Q96PT3 197 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 HELZ2Q9BYK8 2649 aaKnown RBP12.23□□□□□ -0.45
SCARF1-203ENST00000434376 TAX1BP3O14907 124 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 ATP5J2P56134 94 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 GPR82Q96P67 336 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 NACAE9PAV3 2078 aa12.23□□□□□ -0.45
SCARF1-203ENST00000434376 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 ATP6V0E1O15342 81 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 SAP30O75446 220 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 HLA-DRB1P01911 266 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 SRD5A1P18405 259 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 TRGV9Q99603 122 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
SCARF1-203ENST00000434376 WFDC3Q8IUB2 231 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 ITLN2Q8WWU7 325 aaPredicted RBP12.22□□□□□ -0.45
SCARF1-203ENST00000434376 MEGF9Q9H1U4 602 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 GAGE12BA1L429 117 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 GP9P14770 177 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 C5orf17Q8NAS9 161 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
SCARF1-203ENST00000434376 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 FBLL1A6NHQ2 334 aaKnown RBP12.21□□□□□ -0.45
SCARF1-203ENST00000434376 RHOGP84095 191 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 ZNF491Q8N8L2 437 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.45
SCARF1-203ENST00000434376 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 CRYGBP07316 175 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 CFHR4Q92496 578 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 TNFRSF14Q92956 283 aa12.21□□□□□ -0.45
SCARF1-203ENST00000434376 MFAP4P55083 255 aa12.21□□□□□ -0.46
SCARF1-203ENST00000434376 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.46
SCARF1-203ENST00000434376 NEU4Q8WWR8 484 aaPredicted RBP12.21□□□□□ -0.46
SCARF1-203ENST00000434376 FANCD2OSQ96PS1 177 aa12.21□□□□□ -0.46
SCARF1-203ENST00000434376 GAGE10A6NGK3 116 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 A8MWL6 223 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 ERCC8Q13216 396 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 FOXE3Q13461 319 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 C12orf54Q6X4T0 127 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 RPP21Q9H633 154 aaKnown RBP12.2□□□□□ -0.46
SCARF1-203ENST00000434376 IGHV4-61A0A0C4DH41 118 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 C7orf71A4D174 169 aa12.2□□□□□ -0.46
SCARF1-203ENST00000434376 K7EP13 123 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 GTSF1Q8WW33 167 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms