RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 DSCR8Q96T75 97 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 PIEZO1Q92508 2521 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 TBX6O95947 436 aaPredicted RBP3.58□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV1-16P04430 117 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 IGFBP3P17936 291 aaPredicted RBP3.58□□□□□ -1.84
LRRK2-204ENST00000430804 MEF2BQ02080 365 aaPredicted RBP3.58□□□□□ -1.84
LRRK2-204ENST00000430804 LINC00337Q8N6G1 96 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 ZNF479Q96JC4 524 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 PMCHL2Q9BQD1 86 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 MRPS18AQ9NVS2 196 aaKnown RBP3.58□□□□□ -1.84
LRRK2-204ENST00000430804 PRO0255Q9UI72 69 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 HMSDA8MTL9 139 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 FXYD1O00168 92 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 PMVKQ15126 192 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 LSM4Q9Y4Z0 139 aaKnown RBP3.58□□□□□ -1.84
LRRK2-204ENST00000430804 CACNA1IQ9P0X4 2223 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 K7EMT4 169 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 SIVA1O15304 175 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 DKK1O94907 266 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 C21orf62-AS1Q17RA5 79 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 CLLU1Q5K131 121 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 Q8N976 141 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 CHAC1Q9BUX1 264 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 SBF2Q86WG5 1849 aa3.58□□□□□ -1.84
LRRK2-204ENST00000430804 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 KIR2DL5BA0A0G2JN68 375 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 KIR2DL5BA0A0G2JPC4 375 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 A0A1W2PRE2 83 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 I3L3M4 83 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 SFTA3P0C7M3 94 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 Q6ZQT7 251 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 KIR2DL5AQ8N109 375 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 MRPL53Q96EL3 112 aaKnown RBP3.57□□□□□ -1.84
LRRK2-204ENST00000430804 AJUBAQ96IF1 538 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 HHLA3Q9XRX5 114 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 U3KQE9 123 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 SCN1AP35498 2009 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV1-39P01597 117 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV1D-39P04432 117 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 NANOS3P60323 173 aaKnown RBP3.57□□□□□ -1.84
LRRK2-204ENST00000430804 ARL6IP6Q8N6S5 226 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV2D-26A0A0A0MRZ7 120 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 C19orf84I3L1E1 186 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 SMIM6P0DI80 62 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 ZNF134P52741 427 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 KLK9Q9UKQ9 250 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 PARP14Q460N5 1801 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 OTOGLQ3ZCN5 2332 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 A0A087WZ39 114 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 RBM3P98179 157 aaKnown RBP3.57□□□□□ -1.84
LRRK2-204ENST00000430804 PAX2Q02962 417 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 CENPWQ5EE01 88 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 IGHV4OR15-8A0A075B7B6 117 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 A0A087WW49 117 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
LRRK2-204ENST00000430804 C2orf70A6NJV1 201 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 C3orf84H3BNL1 204 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 NXPH4O95158 308 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
LRRK2-204ENST00000430804 C1QBP02746 253 aa3.57□□□□□ -1.84
LRRK2-204ENST00000430804 POLEQ07864 2286 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 IGLV2-18A0A075B6J9 118 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 A0A087WWL8 130 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 C9JQL5 133 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 COX7A2LO14548 114 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 CFPP27918 469 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 DEFB125Q8N687 156 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 MLST8Q9BVC4 326 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 PPP1R3EQ9H7J1 279 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 C10orf55Q5SWW7 151 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 SHANK2-AS3Q9BTD1 123 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 NPDC1Q9NQX5 325 aaPredicted RBP3.56□□□□□ -1.84
LRRK2-204ENST00000430804 CACNA1CQ13936 2221 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 ZFHX2Q9C0A1 2572 aaPredicted RBP3.56□□□□□ -1.84
LRRK2-204ENST00000430804 SHROOM3Q8TF72 1996 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 MPZP25189 248 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 LINC00518Q8N0U6 118 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 IGLV5-52A0A0A0MRZ9 124 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 A6NDX4 124 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 PLA2G1BP04054 148 aaKnown RBP3.56□□□□□ -1.84
LRRK2-204ENST00000430804 DANCRP0C864 163 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 TMEM95Q3KNT9 176 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 APRG1Q8IVJ8 170 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 CHTOPQ9Y3Y2 248 aaKnown RBP3.56□□□□□ -1.84
LRRK2-204ENST00000430804 WNK3Q9BYP7 1800 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 GPR179Q6PRD1 2367 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 CGAP01215 116 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 IGHG2P01859 326 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 FAM3BP58499 235 aaPredicted RBP3.56□□□□□ -1.84
LRRK2-204ENST00000430804 LAGE3Q14657 143 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 PMCHL1Q16048 86 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 Q6ZSV7 163 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 CADP27708 2225 aa3.56□□□□□ -1.84
LRRK2-204ENST00000430804 MYO16Q9Y6X6 1858 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 SNRPEP62304 92 aaKnown RBP3.55□□□□□ -1.84
LRRK2-204ENST00000430804 ZNF833PQ6ZTB9 187 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 MIXL1Q9H2W2 232 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 DMRT1Q9Y5R6 373 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms