RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 KLF17Q5JT82 389 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-208ENST00000430669 RBAKDNA6NC62 111 aa9.21□□□□□ -0.93
PTCH1-208ENST00000430669 CA1P00915 261 aaPredicted RBP9.21□□□□□ -0.93
PTCH1-208ENST00000430669 DTX2Q86UW9 622 aa9.21□□□□□ -0.93
PTCH1-208ENST00000430669 LSM4Q9Y4Z0 139 aaKnown RBP9.21□□□□□ -0.93
PTCH1-208ENST00000430669 IGLC7A0M8Q6 106 aa9.21□□□□□ -0.93
PTCH1-208ENST00000430669 PLNP26678 52 aa9.21□□□□□ -0.93
PTCH1-208ENST00000430669 C18orf15Q96N68 181 aa9.21□□□□□ -0.94
PTCH1-208ENST00000430669 HINT1P49773 126 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-208ENST00000430669 ATOH7Q8N100 152 aa9.21□□□□□ -0.94
PTCH1-208ENST00000430669 KLHL30-AS1Q8NEE0 82 aa9.21□□□□□ -0.94
PTCH1-208ENST00000430669 SRRM4A7MD48 611 aaKnown RBP9.21□□□□□ -0.94
PTCH1-208ENST00000430669 Q0VG73 95 aa9.21□□□□□ -0.94
PTCH1-208ENST00000430669 JKAMPQ9P055 326 aa9.21□□□□□ -0.94
PTCH1-208ENST00000430669 A0A1W2PRX2 142 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 K7ERU9 68 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 TYMSP04818 313 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 ARL6IP6Q8N6S5 226 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 SRD5A1P18405 259 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 MRPL53Q96EL3 112 aaKnown RBP9.2□□□□□ -0.94
PTCH1-208ENST00000430669 TRGV2A0A075B6R0 118 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 H3BVH4 76 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 ZNF726P1Q15940 193 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 RHPN1-AS1Q9BWJ2 59 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 ACACBO00763 2458 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 PRSS46E5RG02 174 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 CTSZQ9UBR2 303 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 D6R8Y8 96 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 LYZL1Q6UWQ5 148 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 VCX2Q9H322 139 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 IL17RELQ6ZVW7 336 aa9.2□□□□□ -0.94
PTCH1-208ENST00000430669 PRSS2P07478 247 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 IGLC1P0CG04 106 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 ADORA2A-AS1P86434 159 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 COL27A1Q8IZC6 1860 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-208ENST00000430669 K7EM74 188 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 PFN1P07737 140 aaKnown RBP9.19□□□□□ -0.94
PTCH1-208ENST00000430669 SPG11Q96JI7 2443 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 IGLV2-14P01704 120 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 SUMO2P61956 95 aaKnown RBP9.19□□□□□ -0.94
PTCH1-208ENST00000430669 PRR20EP86478 221 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 PRR20CP86479 221 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 PRR20DP86480 221 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 PRR20BP86481 221 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 PRR20AP86496 221 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 MUC21Q5SSG8 566 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 RUSC1-AS1Q66K80 236 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 CTAG1AP78358 180 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 IFI27L1Q96BM0 104 aa9.19□□□□□ -0.94
PTCH1-208ENST00000430669 IGKCP01834 107 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 GZMBP10144 247 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 Q8NA96 180 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 Q96MF0 132 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 C22orf46C9J442 243 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 LINC01619G3V211 115 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 VCYO14598 125 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 RNASE1P07998 156 aaKnown RBP9.18□□□□□ -0.94
PTCH1-208ENST00000430669 NDPQ00604 133 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 PRORYQ9H606 182 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 GGTLC3B5MD39 225 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
PTCH1-208ENST00000430669 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 VPREB3Q9UKI3 123 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 SAP30O75446 220 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 RNF224P0DH78 156 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
PTCH1-208ENST00000430669 ELANEP08246 267 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 PRADC1Q9BSG0 188 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 MLANAQ16655 118 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 RCHY1Q96PM5 261 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
PTCH1-208ENST00000430669 NDUFA3O95167 84 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 LCNL1Q6ZST4 164 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 OR9G4Q8NGQ1 327 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 C9JQL5 133 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 V9GYV3 84 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 MUC21A0A0G2JKD1 596 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 MUC21A0A140T8X8 626 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 EVI2AP22794 236 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 LOC102724200A0A096LPH7 203 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-208ENST00000430669 ZNF688P0C7X2 276 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 FBLN7Q53RD9 439 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 SPRNQ5BIV9 151 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 C14orf144Q96I85 54 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 ZNF48Q96MX3 618 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-208ENST00000430669 FCN3O75636 299 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 LTAP01374 205 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 SCGB1A1P11684 91 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms