RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 PXMP4Q9Y6I8 212 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 HEATR5BQ9P2D3 2071 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 NBEAL2Q6ZNJ1 2754 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 SCN3AQ9NY46 2000 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 TENM1Q9UKZ4 2725 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 NCKAP5O14513 1909 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 TRAV8-6A0A0B4J262 113 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 KIR2DS1A0A191URI9 304 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 MEIS3P1A6NDR6 274 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 A6NIN4 97 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 LYZL6O75951 148 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 CYB5AP00167 134 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 HIST1H1EP10412 219 aaKnown RBP2.91□□□□□ -1.94
HMGB3-203ENST00000430118 EVI2AP22794 236 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 CDK2P24941 298 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 HTR1DP28221 377 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SRIP30626 198 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 APOC4P55056 127 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 GNB2P62879 340 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 KIR2DS1Q14954 304 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR8B8Q15620 311 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 MSMO1Q15800 293 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 TNXAQ16473 311 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 MPV17LQ2QL34 196 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 LRRC75BQ2VPJ9 315 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 Q6Q795 121 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF676Q8N7Q3 588 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SIGLECL1Q8N7X8 197 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF615Q8N8J6 731 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 CYB561D1Q8N8Q1 229 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 CDRT4Q8N9R6 151 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR10P1Q8NGE3 313 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR2K2Q8NGT1 345 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR2G3Q8NGZ4 309 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR4K13Q8NH42 304 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR10D3Q8NH80 312 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR13C6PQ8NH95 151 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 KIR2DL5BQ8NHK3 375 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SYNPRQ8TBG9 265 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR51E1Q8TCB6 317 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SMIM19Q96E16 107 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 ADTRPQ96IZ2 230 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SDF2Q99470 211 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 HSPB9Q9BQS6 159 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 ANAPC13Q9BS18 74 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 SPANXDQ9BXN6 97 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 MAP1LC3CQ9BXW4 147 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 RSPO3Q9BXY4 272 aaPredicted RBP2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR51I2Q9H344 312 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 RERGLQ9H628 205 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 OR5V1Q9UGF6 321 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF256Q9Y2P7 627 aaPredicted RBP2.91□□□□□ -1.94
HMGB3-203ENST00000430118 KCNE3Q9Y6H6 103 aa2.91□□□□□ -1.94
HMGB3-203ENST00000430118 HEATR5AQ86XA9 2040 aa2.9□□□□□ -1.94
HMGB3-203ENST00000430118 LOC102724200A0A096LPH7 203 aaPredicted RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 A0A0J9YXY3 114 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 DUXBA0A1W2PPF3 345 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 A0A1W2PRE2 83 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZFP92A6NM28 416 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 FABP5P3A8MUU1 101 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF736B4DX44 427 aaPredicted RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 F8W1H4 67 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM250H0YL14 139 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 H7C1C5 153 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 HSBP1O75506 76 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 DEDDO75618 318 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 LY6HO94772 140 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ORM1P02763 201 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 CHTF8P0CG12 524 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF728P0DKX0 622 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 HIST1H1CP16403 213 aaKnown RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ALOX5APP20292 161 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 RPL12P30050 165 aaKnown RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 GRPRP30550 384 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 PRSS3P35030 304 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF93P35789 620 aaPredicted RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 PPP1CCP36873 323 aaKnown RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 GALR1P47211 349 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF83P51522 516 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 SLC35B1P78383 322 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 PSG7Q13046 419 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 PPP1R1AQ13522 171 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 CDK5R1Q15078 307 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 HLA-DRB5Q30154 266 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 OR10J3Q5JRS4 329 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 GLYATL3Q5SZD4 288 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ARL9Q6T311 187 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 OR2M3Q8NG83 312 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 OR2T10Q8NGZ9 312 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNRF2Q8NHG8 242 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 CLDND2Q8NHS1 167 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF563Q8TA94 476 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ARPC1AQ92747 370 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 WDR34Q96EX3 536 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 AP1S3Q96PC3 154 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 SCGB3A2Q96PL1 93 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms