RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SYS1-DBNDD2H3BUS1 97 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 TCTEX1D4Q5JR98 221 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 APOC4P55056 127 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 IGHV2-70DA0A0C4DH43 119 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 TRAV26-2A0A0B4J265 109 aa12.39□□□□□ -0.43
PTPRF-206ENST00000429895 RBMY1FQ15415 496 aaKnown RBP12.39□□□□□ -0.43
PTPRF-206ENST00000429895 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 TRAV1-1A0A0B4J248 108 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 C9JAW5 83 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 Q6ZRM9 215 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 AKAP6Q13023 2319 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 STPG4Q8N801 248 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 CHAC1Q9BUX1 264 aa12.38□□□□□ -0.43
PTPRF-206ENST00000429895 MPV17L2Q567V2 206 aa12.37□□□□□ -0.43
PTPRF-206ENST00000429895 TMEM190Q8WZ59 177 aa12.37□□□□□ -0.43
PTPRF-206ENST00000429895 IGF2BP2-AS1Q96M15 143 aa12.37□□□□□ -0.43
PTPRF-206ENST00000429895 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
PTPRF-206ENST00000429895 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
PTPRF-206ENST00000429895 COLCA2A8K830 154 aa12.37□□□□□ -0.43
PTPRF-206ENST00000429895 I3L3M4 83 aa12.36□□□□□ -0.43
PTPRF-206ENST00000429895 VWC2Q2TAL6 325 aa12.36□□□□□ -0.43
PTPRF-206ENST00000429895 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-206ENST00000429895 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
PTPRF-206ENST00000429895 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
PTPRF-206ENST00000429895 CACNA1EQ15878 2313 aa12.36□□□□□ -0.43
PTPRF-206ENST00000429895 IGHV1OR15-1A0A075B7D0 117 aa12.36□□□□□ -0.43
PTPRF-206ENST00000429895 QRFPP83859 136 aa12.36□□□□□ -0.43
PTPRF-206ENST00000429895 C8orf86Q6ZUL3 223 aa12.35□□□□□ -0.43
PTPRF-206ENST00000429895 TMEM75Q8N9X5 138 aa12.35□□□□□ -0.43
PTPRF-206ENST00000429895 PFN1P07737 140 aaKnown RBP12.35□□□□□ -0.43
PTPRF-206ENST00000429895 KLF5Q13887 457 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-206ENST00000429895 TEX36Q5VZQ5 186 aa12.35□□□□□ -0.43
PTPRF-206ENST00000429895 TMEM243Q9BU79 118 aa12.35□□□□□ -0.43
PTPRF-206ENST00000429895 ZMAT4Q9H898 229 aa12.35□□□□□ -0.43
PTPRF-206ENST00000429895 LCTP09848 1927 aa12.35□□□□□ -0.43
PTPRF-206ENST00000429895 CACNA1GO43497 2377 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 LRRC37A2A6NM11 1700 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 KIF26BQ2KJY2 2108 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 MPDZO75970 2070 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 A0A1B0GW64 132 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 TCF15Q12870 199 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 HAPLN4Q86UW8 402 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 LY96Q9Y6Y9 160 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 RHODO00212 210 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 IGKV1-39P01597 117 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 IGKV1D-39P04432 117 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 PDE6HQ13956 83 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 FER1L5A0AVI2 2057 aa12.34□□□□□ -0.43
PTPRF-206ENST00000429895 A0A0J9YY99 117 aa12.33□□□□□ -0.43
PTPRF-206ENST00000429895 PRSS29PA6NIE9 313 aa12.33□□□□□ -0.43
PTPRF-206ENST00000429895 ANGP03950 147 aaKnown RBP12.33□□□□□ -0.44
PTPRF-206ENST00000429895 FREM3P0C091 2139 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 IGLV2-23P01705 113 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 RNASE13Q5GAN3 156 aaKnown RBP12.32□□□□□ -0.44
PTPRF-206ENST00000429895 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 SCRT2Q9NQ03 307 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 TPSG1Q9NRR2 321 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 IGKV1OR2-108A0A075B7D4 117 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
PTPRF-206ENST00000429895 CDKN1BP46527 198 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 ATP6V0BQ99437 205 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 TAL2Q16559 108 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 COL4A6Q14031 1691 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 C22orf46C9J442 243 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 MRPL27Q9P0M9 148 aaKnown RBP12.31□□□□□ -0.44
PTPRF-206ENST00000429895 SOCS3O14543 225 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 MMP23AO75900 390 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 RMI2Q96E14 147 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 NDUFA4L2Q9NRX3 87 aa12.31□□□□□ -0.44
PTPRF-206ENST00000429895 YPEL3P61236 119 aaPredicted RBP12.31□□□□□ -0.44
PTPRF-206ENST00000429895 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 Q6ZR03 302 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 REG4Q9BYZ8 158 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 IGKV2D-24A0A075B6R9 120 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 SDHAF1A6NFY7 115 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 ASPHD1Q5U4P2 390 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 NDUFA4O00483 81 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 Q9HAA7 133 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 TMEM14BQ9NUH8 114 aa12.3□□□□□ -0.44
PTPRF-206ENST00000429895 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
PTPRF-206ENST00000429895 FNDC10F2Z333 226 aa12.29□□□□□ -0.44
PTPRF-206ENST00000429895 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
PTPRF-206ENST00000429895 UBE2BP63146 152 aa12.29□□□□□ -0.44
PTPRF-206ENST00000429895 LOXP28300 417 aaPredicted RBP12.29□□□□□ -0.44
PTPRF-206ENST00000429895 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms