RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 NDUFB8O95169 186 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 BCL6BQ8N143 479 aaPredicted RBP10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 M0R3E3 92 aa10.46□□□□□ -0.73
SNRNP200-202ENST00000429650 CRIP1P50238 77 aa10.46□□□□□ -0.73
SNRNP200-202ENST00000429650 RAB1BQ9H0U4 201 aa10.46□□□□□ -0.73
SNRNP200-202ENST00000429650 ODF3BA8MYP8 253 aa10.46□□□□□ -0.74
SNRNP200-202ENST00000429650 GNG7O60262 68 aa10.46□□□□□ -0.74
SNRNP200-202ENST00000429650 HINT1P49773 126 aaPredicted RBP10.46□□□□□ -0.74
SNRNP200-202ENST00000429650 ZNF138P52744 262 aa10.46□□□□□ -0.74
SNRNP200-202ENST00000429650 FANCD2OSQ96PS1 177 aa10.46□□□□□ -0.74
SNRNP200-202ENST00000429650 WNK2Q9Y3S1 2297 aa10.46□□□□□ -0.74
SNRNP200-202ENST00000429650 IGLV11-55A0A075B6I3 123 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 RIGQ13278 110 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 HES1Q14469 280 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 OR5AL1P0C617 328 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 TNFRSF18Q9Y5U5 241 aa10.45□□□□□ -0.74
SNRNP200-202ENST00000429650 A0A1W2PRD5 423 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 A0A1W2PRF3 423 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 A0A1W2PRM7 423 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 NPIPB5A8MRT5 1133 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 M0R1W7 72 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 TIMD4Q96H15 378 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 F8W735 103 aaPredicted RBP10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 PRTN3P24158 256 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 MFAP4P55083 255 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 PDE6HQ13956 83 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 CDSNQ15517 529 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 C8orf49Q96NF6 230 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 SMPXQ9UHP9 88 aa10.44□□□□□ -0.74
SNRNP200-202ENST00000429650 CCL21O00585 134 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 CSN3P07498 182 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 NDPQ00604 133 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 ST20Q9HBF5 79 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 HERV-K104P63124 156 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 ZNF562Q6V9R5 426 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 NEU4Q8WWR8 484 aaPredicted RBP10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 ARPC1AQ92747 370 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 AAMDCQ9H7C9 122 aa10.43□□□□□ -0.74
SNRNP200-202ENST00000429650 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 Q6AWC8 147 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 MAP1LC3CQ9BXW4 147 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 PEF1Q9UBV8 284 aaKnown RBP10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 A0A1B0GV72 72 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 CT45A10P0DMU9 189 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 TTC9CQ8N5M4 171 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
SNRNP200-202ENST00000429650 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 ATP5J2P56134 94 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 DYNAPQ8N1N2 210 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 C21orf62Q9NYP8 219 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 HSPB8Q9UJY1 196 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 C11orf71Q6IPW1 123 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 UNQ5815/PRO19632Q6UWF5 114 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 AP5S1Q9NUS5 200 aa10.41□□□□□ -0.74
SNRNP200-202ENST00000429650 NCBP2LA6PVI3 153 aaKnown RBP10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 IGHV3-23P01764 117 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 ID1P41134 155 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 CSN1S1P47710 185 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 CRYBA4P53673 196 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 ADORA2A-AS1P86434 159 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 MCRIP2Q9BUT9 160 aaKnown RBP10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 CCDC144NLQ6NUI1 221 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 Q6ZVH6 145 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 VMO1Q7Z5L0 202 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 Q8N6K4 173 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 PIMREGQ9BSJ6 248 aa10.4□□□□□ -0.74
SNRNP200-202ENST00000429650 IGKV2-40A0A087WW87 121 aaPredicted RBP10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 SH2D1AO60880 128 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 IGKV2D-40P01614 121 aaPredicted RBP10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 PSG9Q00887 426 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 TMEM189A5PLL7 270 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 OR2T8A6NH00 312 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 LYZL1Q6UWQ5 148 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 THYN1Q9P016 225 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
SNRNP200-202ENST00000429650 TMSB15BA0A087X1C1 80 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 RPL7P18124 248 aaKnown RBP10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 FA2HQ7L5A8 372 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 TMEM213A2RRL7 107 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 EBI3Q14213 229 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 SLC25A34Q6PIV7 304 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 ZNF747Q9BV97 191 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 SCRT2Q9NQ03 307 aa10.38□□□□□ -0.75
SNRNP200-202ENST00000429650 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms