RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PMVKQ15126 192 aa10.28□□□□□ -0.76
LDB3-205ENST00000429277 TRBV20-1A0A075B6N2 111 aa10.28□□□□□ -0.76
LDB3-205ENST00000429277 ELANEP08246 267 aa10.28□□□□□ -0.76
LDB3-205ENST00000429277 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
LDB3-205ENST00000429277 DLEU1O43261 78 aa10.28□□□□□ -0.76
LDB3-205ENST00000429277 SLAQ13239 276 aa10.28□□□□□ -0.76
LDB3-205ENST00000429277 ACACAQ13085 2346 aa10.27□□□□□ -0.76
LDB3-205ENST00000429277 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.76
LDB3-205ENST00000429277 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
LDB3-205ENST00000429277 TP53TG1Q9Y2A0 90 aa10.27□□□□□ -0.77
LDB3-205ENST00000429277 CDKN1BP46527 198 aa10.27□□□□□ -0.77
LDB3-205ENST00000429277 IGFL4Q6B9Z1 124 aa10.27□□□□□ -0.77
LDB3-205ENST00000429277 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.27□□□□□ -0.77
LDB3-205ENST00000429277 XIRP1Q702N8 1843 aaKnown RBP10.27□□□□□ -0.77
LDB3-205ENST00000429277 A0A087X0K7 114 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 TRAV8-3A0A0A6YYJ7 113 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 IGKV1-6A0A0C4DH72 117 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
LDB3-205ENST00000429277 TMEM243Q9BU79 118 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 H3BRN7 92 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 NDUFS6O75380 124 aaKnown RBP10.26□□□□□ -0.77
LDB3-205ENST00000429277 LOXP28300 417 aaPredicted RBP10.26□□□□□ -0.77
LDB3-205ENST00000429277 FHL1Q13642 323 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 IGLV1-44P01699 117 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 RIPPLY3P57055 190 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 RNF144BQ7Z419 303 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 F5H768 121 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 SOCS3O14543 225 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 KAAG1Q9UBP8 84 aa10.26□□□□□ -0.77
LDB3-205ENST00000429277 IGLV3-9A0A075B6K5 115 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 SMKR1H3BMG3 65 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 AZU1P20160 251 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 OCIAD2Q56VL3 154 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 SNHG12Q9BXW3 62 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 EREGO14944 169 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 DKK1O94907 266 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 MLANAQ16655 118 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 C1orf122Q6ZSJ8 110 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 C8orf31Q8N9H6 132 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 LY6HO94772 140 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 NKAPP1Q8N9T2 125 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 OR11H6Q8NGC7 330 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 DOPEY2Q9Y3R5 2298 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 PKIGQ9Y2B9 76 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 LRRK1Q38SD2 2015 aa10.25□□□□□ -0.77
LDB3-205ENST00000429277 GAGE12JA6NER3 117 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 GAGE1Q13065 139 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 GAGE4Q13068 117 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 GAGE5Q13069 117 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 SPINK13Q1W4C9 94 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 C17orf58Q2M2W7 97 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 CR1LQ2VPA4 569 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 PRR25Q96S07 402 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 C20orf144Q9BQM9 153 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
LDB3-205ENST00000429277 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 C18orf32Q8TCD1 76 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 K7EM74 188 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 LINC00205P59089 165 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 ATP6V0BQ99437 205 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 SELENOKQ9Y6D0 94 aa10.24□□□□□ -0.77
LDB3-205ENST00000429277 BOD1L2Q8IYS8 172 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 Q96MF0 132 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 SBF1O95248 1867 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 PAX9P55771 341 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 POU2AF1Q16633 256 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 PYY3Q5JQD4 70 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 THAP8Q8NA92 274 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 SCN5AQ14524 2016 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
LDB3-205ENST00000429277 PYGO2Q9BRQ0 406 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 C9JAW5 83 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 J3QKU1 62 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 Q6ZR03 302 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 C5orf24Q7Z6I8 188 aa10.23□□□□□ -0.77
LDB3-205ENST00000429277 GAGE2AQ6NT46 116 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 A8MWP6 167 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
LDB3-205ENST00000429277 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 TMEM213A2RRL7 107 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 ZNF124Q15973 351 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 LINC00479Q96M42 142 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 K7EMI3 77 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 LGALS9BQ3B8N2 356 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 UTF1Q5T230 341 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 LGALS9CQ6DKI2 356 aa10.22□□□□□ -0.77
LDB3-205ENST00000429277 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
LDB3-205ENST00000429277 HERVK_113P63121 156 aa10.21□□□□□ -0.77
LDB3-205ENST00000429277 LENEPQ9Y5L5 61 aa10.21□□□□□ -0.77
LDB3-205ENST00000429277 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.78
LDB3-205ENST00000429277 TAL2Q16559 108 aa10.21□□□□□ -0.78
LDB3-205ENST00000429277 G3V318 75 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms