RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 FFAR4Q5NUL3 377 aa7.69□□□□□ -1.18
ATG4B-210ENST00000428861 EXOC3-AS1Q8N2X6 119 aa7.69□□□□□ -1.18
ATG4B-210ENST00000428861 BLNKQ8WV28 456 aa7.69□□□□□ -1.18
ATG4B-210ENST00000428861 FXYD5Q96DB9 178 aa7.69□□□□□ -1.18
ATG4B-210ENST00000428861 FUT9Q9Y231 359 aa7.69□□□□□ -1.18
ATG4B-210ENST00000428861 GOLT1BQ9Y3E0 138 aa7.69□□□□□ -1.18
ATG4B-210ENST00000428861 ZNF705GA8MUZ8 300 aaPredicted RBP7.68□□□□□ -1.18
ATG4B-210ENST00000428861 ZNF253O75346 499 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 IFNA5P01569 189 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 GIPP09681 153 aaPredicted RBP7.68□□□□□ -1.18
ATG4B-210ENST00000428861 OR10J4P0C629 311 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 CT45A10P0DMU9 189 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 GUK1Q16774 197 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 SCGB1C1Q8TD33 95 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 AQP10Q96PS8 301 aa7.68□□□□□ -1.18
ATG4B-210ENST00000428861 RNF222A6NCQ9 220 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 SMIM9A6NGZ8 99 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 C17orf112F2Z3M2 114 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 INSP01308 110 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 AZU1P20160 251 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 ERCC8Q13216 396 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
ATG4B-210ENST00000428861 PHYHIPLQ96FC7 376 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 PAXXQ9BUH6 204 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 MRPL32Q9BYC8 188 aaKnown RBP7.67□□□□□ -1.18
ATG4B-210ENST00000428861 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 KCNIP2Q9NS61 270 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 DKK2Q9UBU2 259 aa7.67□□□□□ -1.18
ATG4B-210ENST00000428861 KLK5Q9Y337 293 aaPredicted RBP7.67□□□□□ -1.18
ATG4B-210ENST00000428861 LOC102723971A0A1B0GUV8 181 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 PLAC8L1A1L4L8 177 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 NPIPB6E9PJ23 425 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 SMLR1H3BR10 107 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 JTBO76095 146 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 HBE1P02100 147 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 AMBPP02760 352 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 NBEAP1P0C6P0 100 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 CDKN1BP46527 198 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 RAB2AP61019 212 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 PDE6HQ13956 83 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 FAM222AQ5U5X8 452 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 GFI1BQ5VTD9 330 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 RNF141Q8WVD5 230 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 YTHDF2Q9Y5A9 579 aaKnown RBP7.66□□□□□ -1.18
ATG4B-210ENST00000428861 TIMM9Q9Y5J7 89 aa7.66□□□□□ -1.18
ATG4B-210ENST00000428861 J3KRW8 73 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 ICAM4Q14773 271 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 RRN3P1Q2M238 152 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 FAM122CQ6P4D5 195 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 HSD17B11Q8NBQ5 300 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 OR2T35Q8NGX2 323 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 OR10J6PQ8NGY7 276 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 MRPL53Q96EL3 112 aaKnown RBP7.65□□□□□ -1.18
ATG4B-210ENST00000428861 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 LINC01587Q99440 93 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 TMEM208Q9BTX3 173 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 DNAH6Q9C0G6 4158 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 AGPAT4-IT1Q9H0P7 198 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 PPP1R14DQ9NXH3 145 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 TNFSF18Q9UNG2 199 aa7.65□□□□□ -1.18
ATG4B-210ENST00000428861 IGKV2-40A0A087WW87 121 aaPredicted RBP7.64□□□□□ -1.19
ATG4B-210ENST00000428861 FXYD6-FXYD2A0A087WZ82 144 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 TMEM189A5PLL7 270 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 IGLL5B9A064 214 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 C11orf94C9JXX5 98 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 HMGB3O15347 200 aaKnown RBP7.64□□□□□ -1.19
ATG4B-210ENST00000428861 OR7C2O60412 319 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 LY6G6CO95867 125 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 IGKV2D-40P01614 121 aaPredicted RBP7.64□□□□□ -1.19
ATG4B-210ENST00000428861 SPART-AS1P0CW21 52 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 ATP6V0CP27449 155 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 Q6ZQT7 251 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 ASB13Q8WXK3 278 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 VGLL1Q99990 258 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 SH3BGRL3Q9H299 93 aa7.64□□□□□ -1.19
ATG4B-210ENST00000428861 EPPK1P58107 5090 aaKnown RBP7.63□□□□□ -1.19
ATG4B-210ENST00000428861 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 HTN1P15515 57 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 M6PRP20645 277 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
ATG4B-210ENST00000428861 UBE2L3P68036 154 aaKnown RBP7.63□□□□□ -1.19
ATG4B-210ENST00000428861 ACOT6Q3I5F7 207 aaPredicted RBP7.63□□□□□ -1.19
ATG4B-210ENST00000428861 PRR9Q5T870 116 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 RPL7L1Q6DKI1 246 aaKnown RBP7.63□□□□□ -1.19
ATG4B-210ENST00000428861 OR2G3Q8NGZ4 309 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 ODF3Q96PU9 254 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 NIPSNAP3BQ9BS92 247 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 Q9H3A6 140 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 PRELID1Q9Y255 219 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 DNAH10Q8IVF4 4471 aa7.63□□□□□ -1.19
ATG4B-210ENST00000428861 IGHV4-4A0A075B6R2 117 aa7.62□□□□□ -1.19
ATG4B-210ENST00000428861 TRAV12-3A0A0B4J271 114 aa7.62□□□□□ -1.19
ATG4B-210ENST00000428861 TAS2R60P59551 318 aa7.62□□□□□ -1.19
ATG4B-210ENST00000428861 CD300CQ08708 224 aa7.62□□□□□ -1.19
ATG4B-210ENST00000428861 ZNF266Q14584 549 aa7.62□□□□□ -1.19
ATG4B-210ENST00000428861 KHDC3LQ587J8 217 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms