RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
RHBDF1-204ENST00000428730 TMEM200BQ69YZ2 307 aa12.91□□□□□ -0.34
RHBDF1-204ENST00000428730 TM2D2Q9BX73 214 aa12.91□□□□□ -0.34
RHBDF1-204ENST00000428730 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 CCL8P80075 99 aa12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 COL27A1Q8IZC6 1860 aaPredicted RBP12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 IGKCP01834 107 aa12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 FCER1GP30273 86 aa12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
RHBDF1-204ENST00000428730 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 TMEM160Q9NX00 188 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 PRO0461Q9UI25 63 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 TMEM8BA6NDV4 472 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 GAGE13Q4V321 117 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 RASL11BQ9BPW5 248 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 S4R3C0 116 aa12.89□□□□□ -0.35
RHBDF1-204ENST00000428730 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 GATA4P43694 442 aa12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 GEMIN7Q9H840 131 aaKnown RBP12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 TRAV40A0A0B4J280 105 aa12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 TMEM178AQ8NBL3 297 aa12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 Q8TAT8 98 aa12.88□□□□□ -0.35
RHBDF1-204ENST00000428730 EGR2P11161 476 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 PLSCR4Q9NRQ2 329 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 NCOR1O75376 2440 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 A0A1B0GWB2 263 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 GLRXP35754 106 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 PROCRQ9UNN8 238 aa12.87□□□□□ -0.35
RHBDF1-204ENST00000428730 TCTEX1D4Q5JR98 221 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 PIFOQ8TCI5 191 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 RNF185Q96GF1 192 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 SCNM1Q9BWG6 230 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 TMEM30BQ3MIR4 351 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 MAP1LC3AQ9H492 121 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 IGLV3-9A0A075B6K5 115 aa12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
RHBDF1-204ENST00000428730 TEX22C9J3V5 150 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 TMEM164Q5U3C3 297 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 C22orf34Q6ZV56 151 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 FER1L6-AS2Q96M78 137 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 TACC2O95359 2948 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 H3BRN7 92 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 DPM2O94777 84 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 FHL3Q13643 280 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 SFTA2Q6UW10 78 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 SYT8Q8NBV8 401 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
RHBDF1-204ENST00000428730 APOMO95445 188 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 GATA3P23771 443 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 LYPD2Q6UXB3 125 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 I3L2K1 104 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 IGHG3P01860 377 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 MT-ATP8P03928 68 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 IL4P05112 153 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
RHBDF1-204ENST00000428730 MRPS12O15235 138 aaKnown RBP12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 TNFRSF6BO95407 300 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 ZNF502Q8TBZ5 544 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 MALRD1Q5VYJ5 2156 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 FBXL15Q9H469 300 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 LAMA5O15230 3695 aa12.83□□□□□ -0.36
RHBDF1-204ENST00000428730 SEM1Q6ZVN7 128 aa12.82□□□□□ -0.36
RHBDF1-204ENST00000428730 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
RHBDF1-204ENST00000428730 C8orf86Q6ZUL3 223 aa12.82□□□□□ -0.36
RHBDF1-204ENST00000428730 K7EM74 188 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 NDUFA3O95167 84 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 MC5RP33032 325 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 ZNF491Q8N8L2 437 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 ADGRG4Q8IZF6 3080 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 VSTM5A8MXK1 200 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 SHISA9B4DS77 424 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 SPINK8P0C7L1 97 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 RNF125Q96EQ8 232 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 TNRC18O15417 2968 aaPredicted RBP12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
RHBDF1-204ENST00000428730 HLA-DMBP28068 263 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms