RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 GCGP01275 180 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 CD28P10747 220 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 ID1P41134 155 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 PAFAH1B2P68402 229 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 ADIRFQ15847 76 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 GOLT1AQ6ZVE7 132 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 Q71RC1 249 aaPredicted RBP6.88□□□□□ -1.31
NR1I3-209ENST00000428574 Q86TA4 180 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 BAGE2Q86Y30 109 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 OR2K2Q8NGT1 345 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 CITED2Q99967 270 aaPredicted RBP6.88□□□□□ -1.31
NR1I3-209ENST00000428574 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 TRAV9-1A0A075B6T8 112 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 OVOL1O14753 267 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 ZNF207O43670 478 aaKnown RBP6.87□□□□□ -1.31
NR1I3-209ENST00000428574 FOLR2P14207 255 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 FLI1Q01543 452 aaPredicted RBP6.87□□□□□ -1.31
NR1I3-209ENST00000428574 CT83Q5H943 113 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 TCF24Q7RTU0 167 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 C15orf54Q8N8G6 183 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 OSTCQ9NRP0 149 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
NR1I3-209ENST00000428574 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
NR1I3-209ENST00000428574 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 H3BTX0 84 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 H7BYZ3 331 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-209ENST00000428574 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 IGLV2-8P01709 118 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 SLURP1P55000 103 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 SNRPD3P62318 126 aaKnown RBP6.86□□□□□ -1.31
NR1I3-209ENST00000428574 GNG5P63218 68 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 DCANP1Q8TF63 244 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 NDFIP1Q9BT67 221 aa6.86□□□□□ -1.31
NR1I3-209ENST00000428574 TRAV8-2A0A0B4J237 113 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 K7EN84 100 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 K7EQG2 157 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 M0R3E3 92 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 CSN3P07498 182 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 S100PP25815 95 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 DEFB136Q30KP8 78 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 RNF212Q495C1 297 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 DLX4Q92988 240 aaPredicted RBP6.85□□□□□ -1.31
NR1I3-209ENST00000428574 LINC00477Q96M19 166 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 ODF3Q96PU9 254 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 SPAG8Q99932 426 aaPredicted RBP6.85□□□□□ -1.31
NR1I3-209ENST00000428574 CITED1Q99966 193 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 PSG8Q9UQ74 426 aa6.85□□□□□ -1.31
NR1I3-209ENST00000428574 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 FAM231BA6NCW3 169 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 ZNF138P52744 262 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
NR1I3-209ENST00000428574 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
NR1I3-209ENST00000428574 IBA57Q5T440 356 aaKnown RBP6.84□□□□□ -1.31
NR1I3-209ENST00000428574 TMEM78Q5T7P6 136 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 KCNIP4Q6PIL6 250 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 OR10J6PQ8NGY7 276 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 YPEL4Q96NS1 127 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 MS4A6AQ9H2W1 248 aa6.84□□□□□ -1.31
NR1I3-209ENST00000428574 ZMAT5Q9UDW3 170 aaKnown RBP6.84□□□□□ -1.31
NR1I3-209ENST00000428574 SETXQ7Z333 2677 aaKnown RBP6.84□□□□□ -1.31
NR1I3-209ENST00000428574 F8P00451 2351 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 SCO1O75880 301 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
NR1I3-209ENST00000428574 INSL3P51460 131 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 RPL11P62913 178 aaKnown RBP6.83□□□□□ -1.32
NR1I3-209ENST00000428574 SRSF2Q01130 221 aaKnown RBP6.83□□□□□ -1.32
NR1I3-209ENST00000428574 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 ADAMTSL5Q6ZMM2 481 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 RBPMS2Q6ZRY4 209 aaKnown RBP6.83□□□□□ -1.32
NR1I3-209ENST00000428574 CBLN2Q8IUK8 224 aa6.83□□□□□ -1.32
NR1I3-209ENST00000428574 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms