RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 CNN1P51911 297 aaKnown RBP17.15■□□□□ 0.34
GLI3-202ENST00000428534 RPP25LQ8N5L8 163 aaKnown RBP17.15■□□□□ 0.34
GLI3-202ENST00000428534 RARRES2Q99969 163 aa17.15■□□□□ 0.34
GLI3-202ENST00000428534 ZNF471Q9BX82 626 aaPredicted RBP17.15■□□□□ 0.34
GLI3-202ENST00000428534 OR10J4P0C629 311 aa17.14■□□□□ 0.33
GLI3-202ENST00000428534 HLA-DMBP28068 263 aa17.14■□□□□ 0.33
GLI3-202ENST00000428534 HIST1H1AQ02539 215 aaPredicted RBP17.14■□□□□ 0.33
GLI3-202ENST00000428534 TMUB2Q71RG4 321 aa17.14■□□□□ 0.33
GLI3-202ENST00000428534 HUWE1Q7Z6Z7 4374 aaKnown RBP17.14■□□□□ 0.33
GLI3-202ENST00000428534 NDUFB4O95168 129 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 SEC11BP0C7V7 166 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 STAG3L2P0CL84 134 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 STAG3L3P0CL85 134 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 DEFB1P60022 68 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 FAM74A1Q5RGS3 127 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 RAB24Q969Q5 203 aa17.13■□□□□ 0.33
GLI3-202ENST00000428534 GIG44P09565 113 aaPredicted RBP17.12■□□□□ 0.33
GLI3-202ENST00000428534 CSN1S1P47710 185 aa17.12■□□□□ 0.33
GLI3-202ENST00000428534 OR11H2Q8NH07 326 aa17.12■□□□□ 0.33
GLI3-202ENST00000428534 ZNF503Q96F45 646 aa17.12■□□□□ 0.33
GLI3-202ENST00000428534 DNAH7Q8WXX0 4024 aa17.12■□□□□ 0.33
GLI3-202ENST00000428534 CXorf1O96002 111 aa17.11■□□□□ 0.33
GLI3-202ENST00000428534 TPT1P13693 172 aaKnown RBP17.11■□□□□ 0.33
GLI3-202ENST00000428534 IL17DQ8TAD2 202 aa17.11■□□□□ 0.33
GLI3-202ENST00000428534 XCL2Q9UBD3 114 aa17.11■□□□□ 0.33
GLI3-202ENST00000428534 CTXND1A0A1B0GTU2 59 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 ZNF705FA8MVS1 300 aaPredicted RBP17.1■□□□□ 0.33
GLI3-202ENST00000428534 UMAD1C9J7I0 102 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 ICAM4Q14773 271 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 EIF5AL1Q6IS14 154 aaKnown RBP17.1■□□□□ 0.33
GLI3-202ENST00000428534 CSNK1G2-AS1Q8NCQ2 148 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 RXFP4Q8TDU9 374 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 EDA2RQ9HAV5 297 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 TMEM167BQ9NRX6 74 aa17.1■□□□□ 0.33
GLI3-202ENST00000428534 TSPOP30536 169 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 RANP62826 216 aaKnown RBP17.09■□□□□ 0.33
GLI3-202ENST00000428534 AMTNQ6UX39 209 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 BAP18Q8IXM2 172 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 EXOC3-AS1Q8N2X6 119 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 ARL6IP6Q8N6S5 226 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 SLC35B3Q9H1N7 401 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 GOLT1BQ9Y3E0 138 aa17.09■□□□□ 0.33
GLI3-202ENST00000428534 DYNC2H1Q8NCM8 4307 aaKnown RBP17.08■□□□□ 0.32
GLI3-202ENST00000428534 ZNF705EA8MWA4 302 aaPredicted RBP17.08■□□□□ 0.32
GLI3-202ENST00000428534 BOLA2-SMG1P6H3BVE0 249 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 ARL14EPLP0DKL9 152 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 MIFP14174 115 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 LGALSLQ3ZCW2 172 aaPredicted RBP17.08■□□□□ 0.32
GLI3-202ENST00000428534 PHYHIPLQ96FC7 376 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 LINC00477Q96M19 166 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 Q9H3A6 140 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 OTORQ9NRC9 128 aa17.08■□□□□ 0.32
GLI3-202ENST00000428534 HMGB3O15347 200 aaKnown RBP17.07■□□□□ 0.32
GLI3-202ENST00000428534 ZNF705DP0CH99 300 aaPredicted RBP17.07■□□□□ 0.32
GLI3-202ENST00000428534 ZNF705BP0CI00 300 aaPredicted RBP17.07■□□□□ 0.32
GLI3-202ENST00000428534 ZFP69Q49AA0 526 aa17.07■□□□□ 0.32
GLI3-202ENST00000428534 STOML3Q8TAV4 291 aa17.07■□□□□ 0.32
GLI3-202ENST00000428534 IGF2BP2-AS1Q96M15 143 aa17.07■□□□□ 0.32
GLI3-202ENST00000428534 ODF3Q96PU9 254 aa17.07■□□□□ 0.32
GLI3-202ENST00000428534 AGRNO00468 2067 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 SMIM9A6NGZ8 99 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 NPIPB6E9PJ23 425 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 M0R3E3 92 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 CDKN1BP46527 198 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 FXYD7P58549 80 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 DPPA3Q6W0C5 159 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 CMTM2Q8TAZ6 248 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 SUN5Q8TC36 379 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 NEU1Q99519 415 aa17.06■□□□□ 0.32
GLI3-202ENST00000428534 PRAC2D3DTV9 90 aa17.05■□□□□ 0.32
GLI3-202ENST00000428534 INSP01308 110 aa17.05■□□□□ 0.32
GLI3-202ENST00000428534 GCHFRP30047 84 aa17.05■□□□□ 0.32
GLI3-202ENST00000428534 C11orf68Q9H3H3 251 aaKnown RBP17.05■□□□□ 0.32
GLI3-202ENST00000428534 RBAKDNA6NC62 111 aa17.04■□□□□ 0.32
GLI3-202ENST00000428534 SLC25A5P05141 298 aaKnown RBP17.04■□□□□ 0.32
GLI3-202ENST00000428534 LEPP41159 167 aa17.04■□□□□ 0.32
GLI3-202ENST00000428534 SPINK13Q1W4C9 94 aa17.04■□□□□ 0.32
GLI3-202ENST00000428534 TMEM78Q5T7P6 136 aa17.04■□□□□ 0.32
GLI3-202ENST00000428534 ZNF705AQ6ZN79 300 aaPredicted RBP17.04■□□□□ 0.32
GLI3-202ENST00000428534 SLC51BQ86UW2 128 aa17.04■□□□□ 0.32
GLI3-202ENST00000428534 A0A1B0GVG6 124 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 PGPA6NDG6 321 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 C3orf84H3BNL1 204 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 C9orf47Q6ZRZ4 202 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 TMEM256Q8N2U0 113 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 C20orf144Q9BQM9 153 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 TMEM208Q9BTX3 173 aa17.03■□□□□ 0.32
GLI3-202ENST00000428534 A0A0J9YWU9 116 aa17.02■□□□□ 0.32
GLI3-202ENST00000428534 M0R2Z0 102 aa17.02■□□□□ 0.32
GLI3-202ENST00000428534 EIF3GO75821 320 aaKnown RBP eCLIP17.02■□□□□ 0.32
GLI3-202ENST00000428534 RAB5CP51148 216 aa17.02■□□□□ 0.32
GLI3-202ENST00000428534 MUC7Q8TAX7 377 aa17.02■□□□□ 0.32
GLI3-202ENST00000428534 NKX6-2Q9C056 277 aaPredicted RBP17.02■□□□□ 0.32
GLI3-202ENST00000428534 RYR2Q92736 4967 aa17.02■□□□□ 0.31
GLI3-202ENST00000428534 SACSQ9NZJ4 4579 aa17.01■□□□□ 0.31
GLI3-202ENST00000428534 SERTM2A0A1B0GWG4 89 aa17.01■□□□□ 0.31
GLI3-202ENST00000428534 IQCF2Q8IXL9 164 aa17.01■□□□□ 0.31
GLI3-202ENST00000428534 TRBV7-9A0A0J9YWB2 115 aa17■□□□□ 0.31
GLI3-202ENST00000428534 TMEM189A5PLL7 270 aa17■□□□□ 0.31
GLI3-202ENST00000428534 MAP1LC3B2A6NCE7 125 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms