RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ZNF503Q96F45 646 aa11.98□□□□□ -0.49
VRK2-204ENST00000428021 OR51M1Q9H341 326 aa11.98□□□□□ -0.49
VRK2-204ENST00000428021 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 G3V3Q6 166 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 M0R3E3 92 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 PDE6HQ13956 83 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 BLNKQ8WV28 456 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 FXYD5Q96DB9 178 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 MRPL53Q96EL3 112 aaKnown RBP11.97□□□□□ -0.49
VRK2-204ENST00000428021 KLK5Q9Y337 293 aaPredicted RBP11.97□□□□□ -0.49
VRK2-204ENST00000428021 TIMM9Q9Y5J7 89 aa11.97□□□□□ -0.49
VRK2-204ENST00000428021 INSP01308 110 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 PRM2P04554 102 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 NBEAP1P0C6P0 100 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 C12orf74Q32Q52 190 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 EXOC3-AS1Q8N2X6 119 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 OR2T35Q8NGX2 323 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 OR10J6PQ8NGY7 276 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 RNF141Q8WVD5 230 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 PAXXQ9BUH6 204 aa11.96□□□□□ -0.49
VRK2-204ENST00000428021 HYDINQ4G0P3 5121 aa11.96□□□□□ -0.5
VRK2-204ENST00000428021 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 RNF222A6NCQ9 220 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 NPIPB6E9PJ23 425 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 JTBO76095 146 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 HBE1P02100 147 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 OR10J4P0C629 311 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 Q6ZTC4 211 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 PPP1R14DQ9NXH3 145 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 PRELID1Q9Y255 219 aa11.95□□□□□ -0.5
VRK2-204ENST00000428021 FXYD6-FXYD2A0A087WZ82 144 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
VRK2-204ENST00000428021 CT45A10P0DMU9 189 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 CDKN1BP46527 198 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 EMP1P54849 157 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 ZNF767PQ75MW2 155 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
VRK2-204ENST00000428021 TMEM208Q9BTX3 173 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
VRK2-204ENST00000428021 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 ZNF705GA8MUZ8 300 aaPredicted RBP11.93□□□□□ -0.5
VRK2-204ENST00000428021 OR7C2O60412 319 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 M6PRP20645 277 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 RAB2AP61019 212 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 ZNF266Q14584 549 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 ICAM4Q14773 271 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 ACOT6Q3I5F7 207 aaPredicted RBP11.93□□□□□ -0.5
VRK2-204ENST00000428021 PHYHIPLQ96FC7 376 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 DKK2Q9UBU2 259 aa11.93□□□□□ -0.5
VRK2-204ENST00000428021 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 ATP6V0CP27449 155 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 ERCC8Q13216 396 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 HSD17B11Q8NBQ5 300 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
VRK2-204ENST00000428021 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 LINC00476Q8WZB0 136 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 ODF3Q96PU9 254 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 AAMDCQ9H7C9 122 aa11.92□□□□□ -0.5
VRK2-204ENST00000428021 YTHDF2Q9Y5A9 579 aaKnown RBP11.92□□□□□ -0.5
VRK2-204ENST00000428021 TRAV10A0A0B4J240 114 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 SPART-AS1P0CW21 52 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 AZU1P20160 251 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 TSPOP30536 169 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 TAS2R45P59539 299 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 KHDC3LQ587J8 217 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 GFI1BQ5VTD9 330 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 OR2G3Q8NGZ4 309 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 PSMG3Q9BT73 122 aaPredicted RBP11.91□□□□□ -0.5
VRK2-204ENST00000428021 AGPAT4-IT1Q9H0P7 198 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 VPS13DQ5THJ4 4388 aa11.91□□□□□ -0.5
VRK2-204ENST00000428021 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
VRK2-204ENST00000428021 RPL7L1Q6DKI1 246 aaKnown RBP11.9□□□□□ -0.5
VRK2-204ENST00000428021 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 OR10G4Q8NGN3 311 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 OR10G9Q8NGN4 311 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 OR10G7Q8NGN6 311 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 FAM19A4Q96LR4 140 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 LINC01587Q99440 93 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 SH3BGRL3Q9H299 93 aa11.9□□□□□ -0.5
VRK2-204ENST00000428021 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
VRK2-204ENST00000428021 A0A1W2PPV4 95 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 SMLR1H3BR10 107 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
VRK2-204ENST00000428021 LEPP41159 167 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 TAS2R60P59551 318 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
VRK2-204ENST00000428021 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 VGLL1Q99990 258 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 C20orf144Q9BQM9 153 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 Q9H3A6 140 aa11.89□□□□□ -0.51
VRK2-204ENST00000428021 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
VRK2-204ENST00000428021 IGLL5B9A064 214 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms