RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 SFTPCP11686 197 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 RIGQ13278 110 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 MSRB1Q9NZV6 116 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 CELSR2Q9HCU4 2923 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 SH2D1AO60880 128 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 HOXB4P17483 251 aaPredicted RBP11.26□□□□□ -0.61
ERCC3-202ENST00000426778 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 FANCD2OSQ96PS1 177 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 VGLL1Q99990 258 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 SCRT2Q9NQ03 307 aa11.26□□□□□ -0.61
ERCC3-202ENST00000426778 IGHV3-49A0A0A0MS15 119 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
ERCC3-202ENST00000426778 ZNF80P51504 273 aaPredicted RBP11.25□□□□□ -0.61
ERCC3-202ENST00000426778 ZNF747Q9BV97 191 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 A0A096LNJ9 63 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 K7EQM0 130 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 DPM3Q9P2X0 92 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 CUBNO60494 3623 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 TMEM189A5PLL7 270 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
ERCC3-202ENST00000426778 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-202ENST00000426778 NDUFS7O75251 213 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 RELQ04864 619 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-202ENST00000426778 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 CFHR4Q92496 578 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-202ENST00000426778 ERCC8Q13216 396 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 FAM162BQ5T6X4 162 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
ERCC3-202ENST00000426778 FAM231BA6NCW3 169 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 CCL21O00585 134 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 CACNG7P62955 275 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 TWIST1Q15672 202 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 PET117Q6UWS5 81 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 NHLH1Q02575 133 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 C5orf64Q2M2E5 130 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 RNF182Q8N6D2 247 aa11.23□□□□□ -0.61
ERCC3-202ENST00000426778 RHOGP84095 191 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 OR10AG1Q8NH19 301 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 CBY1Q9Y3M2 126 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 IGHV2-70DA0A0C4DH43 119 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
ERCC3-202ENST00000426778 LINC01545Q5VT33 79 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■■■■ 27.4
ERCC3-202ENST00000426778 ZNF207O43670 478 aaKnown RBP11.22□□□□□ -0.61
ERCC3-202ENST00000426778 NPYP01303 97 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 ORM1P02763 201 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 TMEM11P17152 192 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 EVI2AP22794 236 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 TM4SF20Q53R12 229 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
ERCC3-202ENST00000426778 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.61
ERCC3-202ENST00000426778 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
ERCC3-202ENST00000426778 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
ERCC3-202ENST00000426778 MFAP4P55083 255 aa11.21□□□□□ -0.61
ERCC3-202ENST00000426778 RBX1P62877 108 aa11.21□□□□□ -0.61
ERCC3-202ENST00000426778 CSMD2Q7Z408 3487 aa11.21□□□□□ -0.61
ERCC3-202ENST00000426778 TRAV8-6A0A0B4J262 113 aa11.21□□□□□ -0.62
ERCC3-202ENST00000426778 GPR183P32249 361 aa11.21□□□□□ -0.62
ERCC3-202ENST00000426778 CSN1S1P47710 185 aa11.21□□□□□ -0.62
ERCC3-202ENST00000426778 ECSCRQ19T08 205 aa11.21□□□□□ -0.62
ERCC3-202ENST00000426778 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.62
ERCC3-202ENST00000426778 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
ERCC3-202ENST00000426778 CKS2P33552 79 aa11.2□□□□□ -0.62
ERCC3-202ENST00000426778 Q6ZQT7 251 aa11.2□□□□□ -0.62
ERCC3-202ENST00000426778 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
ERCC3-202ENST00000426778 FAM104BQ5XKR9 115 aa11.2□□□□□ -0.62
ERCC3-202ENST00000426778 PRR25Q96S07 402 aa11.2□□□□□ -0.62
ERCC3-202ENST00000426778 PSG9Q00887 426 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 NMUP48645 174 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 PAX2Q02962 417 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 THYN1Q9P016 225 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 IGHG4P01861 327 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 CTSGP08311 255 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 ZFP36P26651 326 aaKnown RBP11.19□□□□□ -0.62
ERCC3-202ENST00000426778 PCP2Q8IVA1 136 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 ORMDL3Q8N138 153 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 DEFB125Q8N687 156 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 DKK2Q9UBU2 259 aa11.19□□□□□ -0.62
ERCC3-202ENST00000426778 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
ERCC3-202ENST00000426778 CENPEQ02224 2701 aa11.18□□□□□ -0.62
ERCC3-202ENST00000426778 SPRY2O43597 315 aa11.18□□□□□ -0.62
ERCC3-202ENST00000426778 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
ERCC3-202ENST00000426778 COX8AP10176 69 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms