RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 DEFB135Q30KP9 77 aa16.09■□□□□ 0.17
HMGA2-205ENST00000425208 PHYHIPLQ96FC7 376 aa16.09■□□□□ 0.17
HMGA2-205ENST00000425208 CLUHP3Q96NS8 147 aa16.09■□□□□ 0.17
HMGA2-205ENST00000425208 ZNF705FA8MVS1 300 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-205ENST00000425208 DUSP14O95147 198 aaKnown RBP16.08■□□□□ 0.16
HMGA2-205ENST00000425208 EXOC3-AS1Q8N2X6 119 aa16.08■□□□□ 0.16
HMGA2-205ENST00000425208 OR8A1Q8NGG7 326 aa16.08■□□□□ 0.16
HMGA2-205ENST00000425208 MRPL53Q96EL3 112 aaKnown RBP16.08■□□□□ 0.16
HMGA2-205ENST00000425208 RETNQ9HD89 108 aa16.08■□□□□ 0.16
HMGA2-205ENST00000425208 PRELID1Q9Y255 219 aa16.08■□□□□ 0.16
HMGA2-205ENST00000425208 U3KQK5 164 aa16.08■□□□□ 0.16
HMGA2-205ENST00000425208 UMAD1C9J7I0 102 aa16.07■□□□□ 0.16
HMGA2-205ENST00000425208 CXorf1O96002 111 aa16.07■□□□□ 0.16
HMGA2-205ENST00000425208 CNN1P51911 297 aaKnown RBP16.07■□□□□ 0.16
HMGA2-205ENST00000425208 HIST1H1AQ02539 215 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-205ENST00000425208 SSX7Q7RTT5 188 aa16.07■□□□□ 0.16
HMGA2-205ENST00000425208 SLC51BQ86UW2 128 aa16.07■□□□□ 0.16
HMGA2-205ENST00000425208 LYPD1Q8N2G4 141 aa16.07■□□□□ 0.16
HMGA2-205ENST00000425208 RCHY1Q96PM5 261 aa16.07■□□□□ 0.16
HMGA2-205ENST00000425208 NBEAL2Q6ZNJ1 2754 aa16.06■□□□□ 0.16
HMGA2-205ENST00000425208 ZNF705DP0CH99 300 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-205ENST00000425208 ZNF705BP0CI00 300 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-205ENST00000425208 RANP62826 216 aaKnown RBP16.06■□□□□ 0.16
HMGA2-205ENST00000425208 ICAM4Q14773 271 aa16.06■□□□□ 0.16
HMGA2-205ENST00000425208 ZNF726P1Q15940 193 aa16.06■□□□□ 0.16
HMGA2-205ENST00000425208 EIF5AL1Q6IS14 154 aaKnown RBP16.06■□□□□ 0.16
HMGA2-205ENST00000425208 TMED6Q8WW62 240 aa16.06■□□□□ 0.16
HMGA2-205ENST00000425208 TP53TG1Q9Y2A0 90 aa16.06■□□□□ 0.16
HMGA2-205ENST00000425208 M0R3E3 92 aa16.05■□□□□ 0.16
HMGA2-205ENST00000425208 OR10J6PQ8NGY7 276 aa16.05■□□□□ 0.16
HMGA2-205ENST00000425208 C1QTNF4Q9BXJ3 329 aa16.05■□□□□ 0.16
HMGA2-205ENST00000425208 Q9H3A6 140 aa16.05■□□□□ 0.16
HMGA2-205ENST00000425208 TENM3Q9P273 2699 aa16.05■□□□□ 0.16
HMGA2-205ENST00000425208 A8MTW9 85 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 PRAC2D3DTV9 90 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 SPRY2O43597 315 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 GIG44P09565 113 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-205ENST00000425208 PRB4P10163 310 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-205ENST00000425208 GCHFRP30047 84 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 IQCF2Q8IXL9 164 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 RNF183Q96D59 192 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 OVOL2Q9BRP0 275 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 TMEM167BQ9NRX6 74 aa16.04■□□□□ 0.16
HMGA2-205ENST00000425208 NKX2-5P52952 324 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-205ENST00000425208 SLC35B3Q9H1N7 401 aa16.03■□□□□ 0.16
HMGA2-205ENST00000425208 MAP1LC3B2A6NCE7 125 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 FHITP49789 147 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 FAM74A1Q5RGS3 127 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 DPPA3Q6W0C5 159 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 FAM213BQ8TBF2 198 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 MAP1LC3BQ9GZQ8 125 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 PPP1R14DQ9NXH3 145 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 PLA2G2EQ9NZK7 142 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 XCL2Q9UBD3 114 aa16.02■□□□□ 0.16
HMGA2-205ENST00000425208 CSN1S1P47710 185 aa16.02■□□□□ 0.15
HMGA2-205ENST00000425208 FXYD7P58549 80 aa16.02■□□□□ 0.15
HMGA2-205ENST00000425208 AMTNQ6UX39 209 aa16.02■□□□□ 0.15
HMGA2-205ENST00000425208 SUN5Q8TC36 379 aa16.02■□□□□ 0.15
HMGA2-205ENST00000425208 OTORQ9NRC9 128 aa16.02■□□□□ 0.15
HMGA2-205ENST00000425208 STAB2Q8WWQ8 2551 aa16.02■□□□□ 0.15
HMGA2-205ENST00000425208 RAB5CP51148 216 aa16■□□□□ 0.15
HMGA2-205ENST00000425208 FGF8P55075 233 aaPredicted RBP16■□□□□ 0.15
HMGA2-205ENST00000425208 CMTM2Q8TAZ6 248 aa16■□□□□ 0.15
HMGA2-205ENST00000425208 RXFP4Q8TDU9 374 aa16■□□□□ 0.15
HMGA2-205ENST00000425208 NPIPB6E9PJ23 425 aa15.99■□□□□ 0.15
HMGA2-205ENST00000425208 BOLA2-SMG1P6H3BVE0 249 aa15.99■□□□□ 0.15
HMGA2-205ENST00000425208 PGPA6NDG6 321 aa15.98■□□□□ 0.15
HMGA2-205ENST00000425208 AMBPP02760 352 aa15.98■□□□□ 0.15
HMGA2-205ENST00000425208 SPINK13Q1W4C9 94 aa15.98■□□□□ 0.15
HMGA2-205ENST00000425208 CSNK1G2-AS1Q8NCQ2 148 aa15.98■□□□□ 0.15
HMGA2-205ENST00000425208 IGKV2-40A0A087WW87 121 aaPredicted RBP15.97■□□□□ 0.15
HMGA2-205ENST00000425208 M0R2Z0 102 aa15.97■□□□□ 0.15
HMGA2-205ENST00000425208 IGKV2D-40P01614 121 aaPredicted RBP15.97■□□□□ 0.15
HMGA2-205ENST00000425208 OR11H2Q8NH07 326 aa15.97■□□□□ 0.15
HMGA2-205ENST00000425208 SFT2D1Q8WV19 159 aa15.97■□□□□ 0.15
HMGA2-205ENST00000425208 RARRES2Q99969 163 aa15.97■□□□□ 0.15
HMGA2-205ENST00000425208 TMPRSS5Q9H3S3 457 aa15.97■□□□□ 0.15
HMGA2-205ENST00000425208 SULT1A2P50226 295 aa15.96■□□□□ 0.15
HMGA2-205ENST00000425208 MBD3L1Q8WWY6 194 aa15.96■□□□□ 0.15
HMGA2-205ENST00000425208 H2AFB1P0C5Y9 115 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 CDKN1BP46527 198 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 TMEM78Q5T7P6 136 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 C9orf47Q6ZRZ4 202 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 LINC00477Q96M19 166 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 ODF3Q96PU9 254 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 RPH3ALQ9UNE2 315 aa15.95■□□□□ 0.14
HMGA2-205ENST00000425208 A0A1W2PRE2 83 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 RBAKDNA6NC62 111 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 DIRC3C9JPN6 131 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 INSP01308 110 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 SLC25A5P05141 298 aaKnown RBP15.94■□□□□ 0.14
HMGA2-205ENST00000425208 TSPOP30536 169 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 ERCC8Q13216 396 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 ARL6IP6Q8N6S5 226 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 IGF2BP2-AS1Q96M15 143 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 BOLA1Q9Y3E2 137 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 CT45A10P0DMU9 189 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 C5orf17Q8NAS9 161 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 VGLL1Q99990 258 aa15.94■□□□□ 0.14
HMGA2-205ENST00000425208 AGPAT4-IT1Q9H0P7 198 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms