RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 RANP62826 216 aaKnown RBP12.51□□□□□ -0.41
FOXN4-203ENST00000423960 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 LYPD1Q8N2G4 141 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 CSTL1Q9H114 145 aa12.51□□□□□ -0.41
FOXN4-203ENST00000423960 UBE2CO00762 179 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 NHLRC4P0CG21 123 aaPredicted RBP12.5□□□□□ -0.41
FOXN4-203ENST00000423960 RAB5CP51148 216 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 ICAM4Q14773 271 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 OR8A1Q8NGG7 326 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
FOXN4-203ENST00000423960 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
FOXN4-203ENST00000423960 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 DUSP14O95147 198 aaKnown RBP12.49□□□□□ -0.41
FOXN4-203ENST00000423960 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
FOXN4-203ENST00000423960 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
FOXN4-203ENST00000423960 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
FOXN4-203ENST00000423960 IQCF2Q8IXL9 164 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 Q9H3A6 140 aa12.49□□□□□ -0.41
FOXN4-203ENST00000423960 PGPA6NDG6 321 aa12.48□□□□□ -0.41
FOXN4-203ENST00000423960 PRAC2D3DTV9 90 aa12.48□□□□□ -0.41
FOXN4-203ENST00000423960 M0R3E3 92 aa12.48□□□□□ -0.41
FOXN4-203ENST00000423960 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
FOXN4-203ENST00000423960 SULT1A2P50226 295 aa12.48□□□□□ -0.41
FOXN4-203ENST00000423960 FGF8P55075 233 aaPredicted RBP12.48□□□□□ -0.41
FOXN4-203ENST00000423960 OR10J6PQ8NGY7 276 aa12.48□□□□□ -0.41
FOXN4-203ENST00000423960 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
FOXN4-203ENST00000423960 BOLA2-SMG1P6H3BVE0 249 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 H2AFB1P0C5Y9 115 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 CSN1S1P47710 185 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
FOXN4-203ENST00000423960 NUTF2P61970 127 aaKnown RBP12.47□□□□□ -0.41
FOXN4-203ENST00000423960 HIST1H1AQ02539 215 aaPredicted RBP12.47□□□□□ -0.41
FOXN4-203ENST00000423960 FAM74A1Q5RGS3 127 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 ZMAT4Q9H898 229 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 OTORQ9NRC9 128 aa12.47□□□□□ -0.41
FOXN4-203ENST00000423960 A8MTW9 85 aa12.46□□□□□ -0.41
FOXN4-203ENST00000423960 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
FOXN4-203ENST00000423960 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
FOXN4-203ENST00000423960 Q6ZWC4 215 aa12.45□□□□□ -0.42
FOXN4-203ENST00000423960 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
FOXN4-203ENST00000423960 PPP1R14DQ9NXH3 145 aa12.45□□□□□ -0.42
FOXN4-203ENST00000423960 AGRNO00468 2067 aa12.44□□□□□ -0.42
FOXN4-203ENST00000423960 GIG44P09565 113 aaPredicted RBP12.44□□□□□ -0.42
FOXN4-203ENST00000423960 ALKAL2Q6UX46 152 aa12.44□□□□□ -0.42
FOXN4-203ENST00000423960 CMTM2Q8TAZ6 248 aa12.44□□□□□ -0.42
FOXN4-203ENST00000423960 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
FOXN4-203ENST00000423960 A0A1B0GV50 99 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 A0A1W2PRE2 83 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 FXYD7P58549 80 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
FOXN4-203ENST00000423960 DEFB135Q30KP9 77 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 AMTNQ6UX39 209 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 ARL6IP6Q8N6S5 226 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 LINC00477Q96M19 166 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 C1QTNF4Q9BXJ3 329 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 SLC35B3Q9H1N7 401 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 XCL2Q9UBD3 114 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 U3KQK5 164 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 NBEAL2Q6ZNJ1 2754 aa12.43□□□□□ -0.42
FOXN4-203ENST00000423960 IGKV2-40A0A087WW87 121 aaPredicted RBP12.42□□□□□ -0.42
FOXN4-203ENST00000423960 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
FOXN4-203ENST00000423960 NPIPB6E9PJ23 425 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 SPRY2O43597 315 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 IGKV2D-40P01614 121 aaPredicted RBP12.42□□□□□ -0.42
FOXN4-203ENST00000423960 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
FOXN4-203ENST00000423960 UBE2G2P60604 165 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 ERCC8Q13216 396 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 RNF183Q96D59 192 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 RCHY1Q96PM5 261 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 RETNQ9HD89 108 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 TP53TG1Q9Y2A0 90 aa12.42□□□□□ -0.42
FOXN4-203ENST00000423960 YTHDF2Q9Y5A9 579 aaKnown RBP12.42□□□□□ -0.42
FOXN4-203ENST00000423960 TRAV1-1A0A0B4J248 108 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 FAM74A7A6NL05 159 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 DIRC3C9JPN6 131 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 TEX46H3BTG2 121 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 CT45A10P0DMU9 189 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 WWC2-AS2Q96NR7 200 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 VGLL1Q99990 258 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 NKX6-2Q9C056 277 aaPredicted RBP12.41□□□□□ -0.42
FOXN4-203ENST00000423960 AGPAT4-IT1Q9H0P7 198 aa12.41□□□□□ -0.42
FOXN4-203ENST00000423960 RBAKDNA6NC62 111 aa12.4□□□□□ -0.42
FOXN4-203ENST00000423960 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
FOXN4-203ENST00000423960 HBE1P02100 147 aa12.4□□□□□ -0.42
FOXN4-203ENST00000423960 AMBPP02760 352 aa12.4□□□□□ -0.42
FOXN4-203ENST00000423960 PPT1P50897 306 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms